PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907104.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 479aa    MW: 52594.2 Da    PI: 7.4334
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907104.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78.2e-11169210445
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  XP_010907104.1 169 AKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLTQLEQDL 210
                     5889*************************9777777666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-7166242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.197168212IPR004827Basic-leucine zipper domain
PfamPF001704.6E-8169211IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.0E-7170213No hitNo description
CDDcd147081.54E-22170221No hitNo description
Gene3DG3DSA:1.20.5.1704.4E-8171214No hitNo description
PROSITE patternPS000360173188IPR004827Basic-leucine zipper domain
PfamPF141447.6E-31251325IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MENHRVGETG LSESGPSSQP VAYGVHGITP AATNFFDQEG TAYFGELEEA LMQGVAGIRS  60
DGDRKPFFTP PTLEIFPSWP MRFQQTPKGN SQPAKSSDSG SAQNTISQLD LESPVSIKAS  120
SGLRGQQQGM MASDAPRAGA AAPNHQPKTQ DNRRVAGSTA EKDGKILDAK TLRRLAQNRE  180
AARKSRLRKK AYIQQLESSR IKLTQLEQDL QRARSQGLFL GAAGAGGNIS SAAAVFDMEY  240
SRWLDENCKR MTELREGLQA HLSDGDLRVA VDECLTHYDE IFRLKGVAAK SDVFHLITGT  300
WTTPAERFFL WMGGFRPSEL LKILIPQMDP LTEQQLVGIC NLQQSSQQAE EALSQGLEQL  360
HQSLADTVAS GALSEDTNVG NYMSHIAIAL GKLANLEGFV RQADNLRQQT LHQMRRILTV  420
RQAARCFLAI GEYHSRLRAL SSLWASHPRG SLITNESACP TTTDLQIIHQ PVHSHFSAF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907104.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415581e-131HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM0S5R80.0M0S5R8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P06770_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-142bZIP family protein