PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010905949.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 382aa    MW: 42396.9 Da    PI: 8.9381
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010905949.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1346.5e-1192135245
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     +++k+ rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_010905949.1  92 PADKVLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQEL 135
                     689****************************9777777666544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.1E-887137No hitNo description
SMARTSM003382.7E-891154IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.01393137IPR004827Basic-leucine zipper domain
PfamPF001708.7E-893135IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-795137No hitNo description
CDDcd147081.38E-2195147No hitNo description
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
PfamPF141441.5E-31182256IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MLQGPAGAFH VISSPNSMSS ASAQFATSRR MGIYEPNHQI SMWGDSFKAD SSQNTGASTI  60
VEADAKHDNR LGDIPRESSG PSKKYDQEAH KPADKVLRRL AQNREAARKS RLRKKAYVQQ  120
LESSRLKLSQ LEQELERARQ QGVYVGGHLG DSTLGLSGTV NSGVAAFEME YGHWVEEQNR  180
QTCELRTALQ AHVSDIELRM LVESGMSHYD NLFRIKAIAA KSDVFYLMSG MWKTSAERFF  240
LWIGGFRPSE LLKVLSPQLD PLTEQQVVAV CNLQQSSQQA EDALSQGMDK LQQTLAETLT  300
SDPLGASGVA NYMGQMANAM GKLEALVSFV NQADHLRQQT LQQMYKILTT RQAARGLLAL  360
GDYFQRLRAL SSLWAARPRE PA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905949.10.0PREDICTED: transcription factor TGA4-like isoform X2
SwissprotQ392371e-173TGA1_ARATH; Transcription factor TGA1
TrEMBLM0SZ420.0M0SZ42_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P16630_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-162bZIP family protein