PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00119.1.p
Common NameEUGRSUZ_J00119, LOC104420989
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 344aa    MW: 37894.2 Da    PI: 5.467
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00119.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-10142200563
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +     l+se+
  Eucgr.J00119.1.p 142 KRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLTSEN 200
                       9*****************************************99988877777666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-16138202IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726140203IPR004827Basic-leucine zipper domain
PfamPF001703.1E-9142196IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10142196No hitNo description
SuperFamilySSF579599.85E-11142193No hitNo description
CDDcd147033.55E-23143192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MELPEPPNPP NPNPQIPAPR NPAMPQFHHR RARSEVGFRM PDDGDPFDNA ASGSFEDLGS  60
EDDLLSTYMD MDKIGDKLDG GPGSGPRLDN ADVVGGGGGE KGGRPRHRYS NSADGSSVLE  120
GIEAKKAMAP DKLAELWAVD PKRAKRILAN RQSAARSKER KARYISELER KVQTLQTEAT  180
TLSAQLTLFQ RDTTGLTSEN AELELRLQVM EQQAQLRDAL NEALKKEVER LKIATGEMMT  240
PTDTYNLEML QYPYSQPSFF PPQQQPRSVD FRNMQMPQFN MFHMNIAASG QSPTVPTHSH  300
GFSELLQHDS LGRLEGLEIS NRGSHLVKSE GSTISASESS STY*
Functional Description ? help Back to Top
Source Description
UniProtTranscrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00119.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031087.10.0PREDICTED: transcription factor RF2b
SwissprotO228731e-110BZP18_ARATH; bZIP transcription factor 18
TrEMBLA0A059A9E00.0A0A059A9E0_EUCGR; Uncharacterized protein
STRINGXP_010031087.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40422757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-105bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Pawar V, et al.
    A novel family of plant nuclear envelope-associated proteins.
    J. Exp. Bot., 2016. 67(19): p. 5699-5710
    [PMID:27630107]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
    Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
    Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
    [PMID:9356517]