PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G02354.1.p
Common NameEUGRSUZ_G02354
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 194aa    MW: 21807.4 Da    PI: 10.3291
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G02354.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP124.71e-38311512132
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaks 93 
                       +gkkdrhski T +g+RdRR+Rls+++ ++fF Lqd+LGfdk+sktieWLl ++  +ike +g + +++++c     +         ++a+++
  Eucgr.G02354.1.p  31 TGKKDRHSKIRTVQGLRDRRIRLSVQVSRKFFGLQDMLGFDKASKTIEWLLSKSRNSIKEVVGRNITKQKDCgG---D--------VKAAQAE 112
                       79**************************************************************9999999921...2........2223333 PP

               TCP  94 aakskksqksaasalnlakesrakarararertrekmri 132
                       a+ +++++++ ++  ++ k+  a++r++arer rek+ +
  Eucgr.G02354.1.p 113 AEAEHEQEQDVSNRKEKIKSCDARERENARERAREKNPN 151
                       446667777777777888888888888888888888765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.0E-333198IPR005333Transcription factor, TCP
PROSITE profilePS5136933.0483391IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
TTPPKSRVDA NGVRVADPAK NKKALPRKRN TGKKDRHSKI RTVQGLRDRR IRLSVQVSRK  60
FFGLQDMLGF DKASKTIEWL LSKSRNSIKE VVGRNITKQK DCGGDVKAAQ AEAEAEHEQE  120
QDVSNRKEKI KSCDAREREN ARERAREKNP NASVFSGADG LCAHQQPINN DDSAQEYGQF  180
ASEMDDSLSM IDKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G02354.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068762.11e-140PREDICTED: transcription factor TCP12
TrEMBLA0A059BGH11e-140A0A059BGH1_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010068762.11e-139(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116322533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-27TCP family protein