PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B02398.1.p
Common NameEUGRSUZ_B02398, LOC104432765, ZFP2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 173aa    MW: 18825.9 Da    PI: 8.7951
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B02398.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.0003992114123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++Cg  F+    L  H+r+H
  Eucgr.B02398.1.p  92 HECSICGLEFPMGQALGGHMRRH 114
                       78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.15E-841114No hitNo description
PROSITE profilePS5015710.5964370IPR007087Zinc finger, C2H2
PfamPF139121.5E-104368IPR007087Zinc finger, C2H2
SMARTSM003550.544365IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
PfamPF139123.4E-1291116IPR007087Zinc finger, C2H2
PROSITE profilePS501579.16292119IPR007087Zinc finger, C2H2
SMARTSM003550.1292114IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MVKRDREDAE VEALAVANCL MLLPRVGECA DSNRESRSTE RMFACKTCNR EFSSFQALGG  60
HRTSHKKQKL IPGGLFHLGC TADSSPAKPK RHECSICGLE FPMGQALGGH MRRHRAAMAE  120
GLAAEAAKPV PVLKRSNSKR VMCLDLNSSL MEDDLTLRLG KVAPPLVLDL LL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B02398.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4801900.0KC480190.1 Eucalyptus grandis C2H2-type zinc finger protein 2 (ZFP2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010043589.11e-123PREDICTED: zinc finger protein ZAT8-like
SwissprotQ9LX855e-37ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLM9Z0U51e-123M9Z0U5_EUCGR; C2H2-type zinc finger protein 2
STRINGPOPTR_0010s21650.17e-48(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM53128150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.15e-37C2H2 family protein