PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01143.1.p
Common NameEUGRSUZ_A01143, LOC104435593
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 207aa    MW: 21680.5 Da    PI: 7.9026
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01143.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP101.11.9e-3147119766
               TCP   7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............s 66 
                       +  ++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tg               
  Eucgr.A01143.1.p  47 PARDRHTKVNGRGRRIRIPALCAARIFQLTRELGHRSDGETIEWLLRCAEPSIIAATGYgsmpadpitttvgA 119
                       5689*******************************************************44444444444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136925.03548102IPR017887Transcription factor TCP subgroup
PfamPF036342.8E-2648112IPR005333Transcription factor, TCP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MGSIVSPQDF PSSDQNSPPN LAAAAVEAPP PKPHRQVALS RKSTAAPARD RHTKVNGRGR  60
RIRIPALCAA RIFQLTRELG HRSDGETIEW LLRCAEPSII AATGYGSMPA DPITTTVGAL  120
PPSSTPASAP CPAQPLALAP PAAGHGAFPI SPPPDCRLDL SQPNGFDFSA GGCATNGYRH  180
MPFTALLLQP TATEEAEERQ QREILG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01143.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010046620.11e-147PREDICTED: transcription factor TCP11
SwissprotQ9SJK71e-38TCP11_ARATH; Transcription factor TCP11
TrEMBLA0A059DDZ61e-146A0A059DDZ6_EUCGR; Uncharacterized protein
STRINGXP_010046620.11e-147(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM152651618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37000.15e-38TCP family protein