PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS571845.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Nin-like
Protein Properties Length: 285aa    MW: 31658.5 Da    PI: 7.9586
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS571845.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK46.85.6e-151252852
        RWP-RK 28 clTvLKriCRqyGIkRWPhRkiksl 52
                  c+T+LKriCRq+GI+RWP+Rkik++
  EcS571845.10  1 CPTTLKRICRQHGIARWPSRKIKKV 25
                  9**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020423.0E-12125IPR003035RWP-RK domain
PROSITE profilePS5151912.241145IPR003035RWP-RK domain
SuperFamilySSF542778.69E-27183270No hitNo description
PROSITE profilePS5174526.775183266IPR000270PB1 domain
SMARTSM006664.1E-30183266IPR000270PB1 domain
PfamPF005641.7E-21184265IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2402.3E-25184265No hitNo description
CDDcd064078.59E-48184265No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
CPTTLKRICR QHGIARWPSR KIKKVNHSLK KLQHVIDSVQ GAKGTIKLGS FYESFPELST  60
EISGEGPSSS KQSDPPKKTD HQPDINIDNS AATISKSPSA SCSQCSTSTT SGSNEANVHS  120
TTILASSGRN DQIIEDPFKL LKRARSHAEL HEPQILARSH SHMSFDQHPL PNIQGHHLQD  180
GLIFRVKATF GEEKIRLVLQ PTWGFADLRQ EIAKRFSIDD VGGIDLKYLD DDGEWVLLTC  240
DADLEECMDV YRTSQGHTIR MSVHPASHPH RNSLGSSGHT DKRFL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066333.10.0PREDICTED: protein NLP2-like
RefseqXP_010066334.10.0PREDICTED: protein NLP2-like
SwissprotQ7X9B93e-77NLP2_ARATH; Protein NLP2
TrEMBLA0A059BDT60.0A0A059BDT6_EUCGR; Uncharacterized protein
STRINGVIT_03s0038g03710.t012e-83(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19982777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.12e-76Nin-like family protein