PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC058338.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 167aa    MW: 17854.8 Da    PI: 4.5732
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC058338.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.18.2e-1382136256
                   XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                   +++k+ rr  +NR AA rsR+RKka+++ Le k+k Le+e ++L   l+    e+
  EcC058338.10  82 PASKKLRRQLRNRDAAVRSRERKKAYVKDLEVKSKYLEGECRRLGRLLQCVMAES 136
                   689*************************************998876666555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.6E-781145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.01383140IPR004827Basic-leucine zipper domain
PfamPF001704.3E-1183140IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-1183144No hitNo description
SuperFamilySSF579595.5E-1185141No hitNo description
CDDcd147043.73E-1486137No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
IENILMKDDE DGGVVGGGIR ADSSQEFCDR FLADVLVESP GDGSAEIADG SGDKEEPGSS  60
DDGGIEAAKV DGANGGGEAY DPASKKLRRQ LRNRDAAVRS RERKKAYVKD LEVKSKYLEG  120
ECRRLGRLLQ CVMAESQALR FSLQNSECGA SVAKLESAVL SGMRLEP
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041444.11e-93PREDICTED: bZIP transcription factor 60
SwissprotQ69XV07e-26BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLA0A058ZRB73e-92A0A058ZRB7_EUCGR; Uncharacterized protein
STRINGXP_010041444.16e-93(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46342848
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.12e-12basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]