PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051199.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family HD-ZIP
Protein Properties Length: 406aa    MW: 45249.9 Da    PI: 8.6703
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051199.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.4e-191775357
                  --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
      Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  EcC051199.10 17 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                  5679*****************************************************97 PP

2START181.64.5e-571613692205
                   HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEE CS
         START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmva 96 
                   +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  ++   v+e+l+d++ W ++++++++ +v+ssg  g+++l ++
  EcC051199.10 161 IAEETLTEFLSKATGTAVEWVQLPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPS-RVAEILKDRPSWYRDCRAVDVANVLSSGngGTVELLYM 256
                   789*******************************************************.8888888888**************************** PP

                   XXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHH CS
         START  97 elqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksgl 189
                   +l+a+++l+p Rdf+ +Ry+  +++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l++s++
  EcC051199.10 257 QLYAPTTLAPaRDFWLLRYTSVMEDGSLVVCERSINNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESST 353
                   *****************************************9988899************************************************* PP

                   HHHHHHHHHHTXXXXX CS
         START 190 aegaktwvatlqrqce 205
                     +++t++a+l++ ++
  EcC051199.10 354 LLAQRTTMAALRNPRQ 369
                   ***********99875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.581276IPR001356Homeobox domain
SMARTSM003891.3E-151480IPR001356Homeobox domain
CDDcd000863.62E-161777No hitNo description
SuperFamilySSF466891.97E-171780IPR009057Homeodomain-like
PfamPF000466.1E-171875IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.8E-191975IPR009057Homeodomain-like
CDDcd146864.54E-669108No hitNo description
PROSITE profilePS5084825.829151352IPR002913START domain
CDDcd088752.13E-83155370No hitNo description
Gene3DG3DSA:3.30.530.201.3E-23160365IPR023393START-like domain
SuperFamilySSF559611.51E-37160362No hitNo description
SMARTSM002341.4E-40160370IPR002913START domain
PfamPF018521.5E-54161369IPR002913START domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MAVTSACKDK MGIDNGKYVR YTPEQVEALE RLYHECPKPS SLRRQQLIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENSYFRQQ  120
TQNATLATTD TSCESVVTSG QHHLTPQHPP RDASPAGLLS IAEETLTEFL SKATGTAVEW  180
VQLPGMKPGP DSIGIIAISH GCTGVAARAC GLVGLEPSRV AEILKDRPSW YRDCRAVDVA  240
NVLSSGNGGT VELLYMQLYA PTTLAPARDF WLLRYTSVME DGSLVVCERS INNTQNGPSM  300
PPVQHFVRAE MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTLLAQRTT  360
MAALRNPRQI SQEVSQPNVT GWGRRPAALR ALGQRLSKYV GTLSLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047286.10.0PREDICTED: homeobox-leucine zipper protein ATHB-8-like
SwissprotQ391230.0ATHB8_ARATH; Homeobox-leucine zipper protein ATHB-8
TrEMBLA0A059CMJ70.0A0A059CMJ7_EUCGR; Uncharacterized protein
STRINGVIT_04s0008g03250.t010.0(Vitis vinifera)
STRINGPGSC0003DMT4000749320.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM20222678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0homeobox gene 8