PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC038364.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 270aa    MW: 29747.9 Da    PI: 9.9634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC038364.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.31.5e-3238052128
           NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++elvg+kktLvfykgrap+gek++Wvmheyr+
  EcC038364.10   3 KMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSvTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRI 80 
                   56889*************************************9989999***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100542.0841101IPR003441NAC domain
SuperFamilySSF1019412.35E-383101IPR003441NAC domain
PfamPF023651.7E-15880IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSVTSE LVGMKKTLVF  60
YKGRAPRGEK SNWVMHEYRI HSKSAFRTAK DEWVVCRVFQ KSAGAKKYPS SQSRAVPPYN  120
LEIGSSVVPP TMMPPENFQF LGRNYMNGAD LAEINRVLRS GAMSVNQPMP PQLNPTGTTG  180
GCFTISGLNL NLGGATSQPV LRPVMQAPPG PAMSHQDMVV GSTMMSSSTA LVGDQAGGYG  240
GEMGHANVGG NRYLGMENCM EMDNYWPPAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-35110765171NO APICAL MERISTEM PROTEIN
1ut4_B4e-35110765171NO APICAL MERISTEM PROTEIN
1ut7_A4e-35110765171NO APICAL MERISTEM PROTEIN
1ut7_B4e-35110765171NO APICAL MERISTEM PROTEIN
3swm_A5e-35110768174NAC domain-containing protein 19
3swm_B5e-35110768174NAC domain-containing protein 19
3swm_C5e-35110768174NAC domain-containing protein 19
3swm_D5e-35110768174NAC domain-containing protein 19
3swp_A5e-35110768174NAC domain-containing protein 19
3swp_B5e-35110768174NAC domain-containing protein 19
3swp_C5e-35110768174NAC domain-containing protein 19
3swp_D5e-35110768174NAC domain-containing protein 19
4dul_A4e-35110765171NAC domain-containing protein 19
4dul_B4e-35110765171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010048462.10.0PREDICTED: NAC domain-containing protein 92
RefseqXP_010048463.10.0PREDICTED: NAC domain-containing protein 92
RefseqXP_010048464.10.0PREDICTED: NAC domain-containing protein 92
TrEMBLA0A059CQF70.0A0A059CQF7_EUCGR; Uncharacterized protein
STRINGXP_010048462.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68512841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.23e-78NAC domain containing protein 38