PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC023231.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 130aa    MW: 14446.2 Da    PI: 7.6316
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC023231.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00013856321
                  ETTTTEEESSHHHHHHHHH CS
       zf-C2H2  3 CpdCgksFsrksnLkrHir 21
                  C+ C ksF ++  L+ H+r
  EcC023231.10 38 CNWCEKSFQSQPALNGHMR 56
                  ******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139128.3E-63656IPR007087Zinc finger, C2H2
PROSITE profilePS501578.5383658IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.7E-43657IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MEGGKELALS GSFSAGTMEG GKKKRQRSEL DASGGHGCNW CEKSFQSQPA LNGHMRVYKD  60
WPRRQDKQPK QHVHEEKDEE VVSVLLKLQK GTLNKQEMKG DDGAVSSSAA EVQRKKIHMA  120
LDLNEVAPEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12126KKKRQR