PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC011684.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 242aa    MW: 25674.3 Da    PI: 9.6349
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC011684.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000276385223
                  EETTTTEEESSHHHHHHHHHH.T CS
       zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                   C+ Cg++F+  ++++ H+ + H
  EcC011684.10 63 ACSQCGEVFPKLESMELHQAVrH 85
                  6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002806285IPR007087Zinc finger, C2H2
SuperFamilySSF563991.25E-1587242No hitNo description
Gene3DG3DSA:3.90.228.101.3E-589242IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
LLSRKGGAGS SSSRSLGGST RSHGGGGGSS RGMQFRKLSG CYECHMIVDP SRYPLTPRST  60
ICACSQCGEV FPKLESMELH QAVRHAVSEL GPEDSGRHIV EIIFKSSWLK KDNPICKIER  120
ILKVHTTQRT IQRFEDCRDA VKTRALASAR RNPRCAADGN ELLRFHCTTL ACALGSGGST  180
SLCGSVPGCG VCTVIRHGFH AKSQGGGGGG VCTTASSGRA HDSLRCADGR RAMLVCRVIA  240
GR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061047.11e-143PREDICTED: uncharacterized protein LOC104448832
TrEMBLA0A059BQ151e-141A0A059BQ15_EUCGR; Uncharacterized protein
STRINGXP_010061047.11e-143(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19162880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-105C2H2-like zinc finger protein