PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003298.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 166aa    MW: 18989.1 Da    PI: 10.4093
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003298.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.72.2e-273286155
       G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                  k r+rWt+ LH++F+e+v++LGG+e A Pk il+lm+v+gLt+ h+kSHLQk R+
  EcC003298.20 32 KRRIRWTQHLHNQFLECVNRLGGAETAKPKLILKLMDVEGLTIFHIKSHLQKCRI 86
                  68**************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.5292989IPR017930Myb domain
SuperFamilySSF466891.79E-152986IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-253087IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-203287IPR006447Myb domain, plants
PfamPF002492.7E-63684IPR001005SANT/Myb domain
PfamPF143792.2E-12122161IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0016491Molecular Functionoxidoreductase activity
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
LEKGPPVSRN EAKPDADPGG NSNSLAAATS SKRRIRWTQH LHNQFLECVN RLGGAETAKP  60
KLILKLMDVE GLTIFHIKSH LQKCRIAKCI AESREGKISA FTMMSPNEYS LGKLIAEDFC  120
KTLLMQLNVQ KRLLHQLEMQ RSLQMKIEEQ GRQLKRYLEQ RLHNKN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765655.13e-44PREDICTED: probable transcription factor KAN3 isoform X1
TrEMBLA0A061F4K86e-44A0A061F4K8_THECC; Myb-like HTH transcriptional regulator family protein, putative isoform 1
STRINGVIT_08s0007g06310.t013e-42(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-43G2-like family protein