PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC003203.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 247aa    MW: 26914.2 Da    PI: 6.3915
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC003203.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002288110123
                   EEETTTTEEESSHHHHHHHHHHT CS
       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                   ++C++C++ F ++  L  H++ H
  EcC003203.20  88 FSCNYCKRKFYSSQALGGHQNAH 110
                   89*****************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.21E-686116No hitNo description
PROSITE profilePS5015711.40688115IPR007087Zinc finger, C2H2
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MLPRNSDSGT ENESSDFSTQ VASDACVQEI SVDPSKVTSA TSLDQDDVSL DLTLFCHSNA  60
PAEANAVGES NNTEAVDRAS VVKLPRVFSC NYCKRKFYSS QALGGHQNAH KRERTMAKRA  120
MRMGMFSNRY TSLASLPLHG ATFRSLGIEA HSGVHHQNAV APESRPAVLR GGAKFEKGCM  180
GLPMFVEEDD VVPLFWPGSF RQLDTRDCTS DPSPSVDYVI KGSNVNFVQV TKLPQIETPS  240
PDLTLKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010043932.10.0PREDICTED: zinc finger protein 4 isoform X1
RefseqXP_010043934.10.0PREDICTED: zinc finger protein 4 isoform X1
RefseqXP_010043935.10.0PREDICTED: zinc finger protein 4 isoform X1
TrEMBLA0A059D6850.0A0A059D685_EUCGR; Uncharacterized protein
STRINGXP_010043932.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-41zinc finger protein 4