PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do024028.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 770aa    MW: 88132.3 Da    PI: 6.2154
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do024028.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.12.2e-294275711128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikev.d...iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra..........tk 79 
                 lp+G++F+P+d el+ e+L++k+          +  +e+i++v d   i++++P++Lp  +k++ ++ +fF++ +k+y +g+rk+r            +
  Do024028.1 427 LPAGVKFDPSDLELL-EHLEEKIGLGGlnphvlI--DEFIPTVeDdegICYTHPENLP-GMKKDGSSAHFFHRVSKAYGRGQRKRRRvvscsdhavaDE 521
                 799************.99****988876665432..333444421344**********.67788899*******************6588888887656 PP

         NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrap..kgektdWvmheyrl 128
                 + +W++tg++k++++ +g ++g kk++v+yk +++  k+ +++Wvmh+y+l
  Do024028.1 522 HVRWHKTGRSKPIYE-NGVKKGWKKIMVLYKTQQKggKPDRAHWVMHQYHL 571
                 899************.999***********76555115569********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047245.6E-16841373IPR006813Glycosyl transferase, family 17
SuperFamilySSF1019411.27E-34411590IPR003441NAC domain
PROSITE profilePS5100528.743427590IPR003441NAC domain
PfamPF023651.3E-11428571IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006487Biological Processprotein N-linked glycosylation
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003830Molecular Functionbeta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    Send to blast
MEAGYCNRKK TDICEGVCDN ECGSKSVLSM SRLKCALRGF DLRALLILLI GVPILIFAIY  60
VHGQKVTYFL RPIWEKPPKP FTILPHYYSE NVTMNNLCKL HGWKVRETPR RVFDAVLFSN  120
EMDILDIRWH ELSPYVSEFV LLESNSTFTG IKKDLHFKEN RQRFEFAESR LTYGMIGGRF  180
VKGENPFVEE SYQRVALDQL IKIAGITHDD LLIMSDVDEI PSGHTINLLR WCDDIPEILH  240
LQLRNYLYSF QFLLDDKSWR ASVHRYRAGN TRYAHFRQTD KLLADSGWHC SFCFRYINDF  300
VFKMKAYSHV DRIRFKYFLD PKRIQHVICE GADLFDMLPE EYTFQEIIAK LGPIPSTFSA  360
VHLPAYLLEQ IDRSWLITYR GIAKKIRYTT PSANRQISGL IAEARRECPN CSHVIDNSDV  420
AMQWPGLPAG VKFDPSDLEL LEHLEEKIGL GGLNPHVLID EFIPTVEDDE GICYTHPENL  480
PGMKKDGSSA HFFHRVSKAY GRGQRKRRRV VSCSDHAVAD EHVRWHKTGR SKPIYENGVK  540
KGWKKIMVLY KTQQKGGKPD RAHWVMHQYH LGEEEDEKDG ELAVSKIFCQ IPNKRMEVSE  600
TETACEEPDT STSVIGPKTP KTNTPQPRHP NNSPCETDLN VSILQDQLLL QDEEGPTISI  660
VSLEDDAVNP AWCAGAEEPQ ASGGASRAQL NPDESLLCRE DPNSLNDEAL LPLDYPILSQ  720
CRNEILDRNL NTFYGLPDLH NVDLGTPPDL QLADLQFGSQ ESFGSWLDRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1504508RKRRR
2505509KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9524770.0EU952477.1 Zea mays clone 1281886 N-acetylglucosaminyltransferase III mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-73NAC family protein