PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do019007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 341aa    MW: 38387.1 Da    PI: 6.4513
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do019007.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.12.6e-3011401128
         NAM   1 lppGfrFhPtdeelvveyLkk..kvegkklelee.vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatg 87 
                 lp+G++F+P+d+el+++ L+k  kv  k++++ + +i+++d    +++++P++Lp  vk++ +  +fF+++ k+y+tg++k+r+++     + +W++tg
  Do019007.1   1 LPKGVKFDPSDQELLWHLLAKigKVGVKPHPFINeFIPTIDsnegLCYTHPQKLP-GVKQDGSVSHFFHRTFKSYTTGTKKRRKINtdelgEVRWNKTG 98 
                 799************888876334555664443323555554455**********.677888899******************75445666899***** PP

         NAM  88 kdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128
                 k+k+v+  +g++ g+kk++v y  +++ g+  kt+Wv+h+y++
  Do019007.1  99 KTKPVVI-GGTHLGCKKIMVMYASNEKGGKqgKTNWVIHQYHV 140
                 *******.999***********66555444449********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-311159IPR003441NAC domain
PROSITE profilePS5100529.0131159IPR003441NAC domain
PfamPF023651.3E-122140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
LPKGVKFDPS DQELLWHLLA KIGKVGVKPH PFINEFIPTI DSNEGLCYTH PQKLPGVKQD  60
GSVSHFFHRT FKSYTTGTKK RRKINTDELG EVRWNKTGKT KPVVIGGTHL GCKKIMVMYA  120
SNEKGGKQGK TNWVIHQYHV GTGEDEKDSE FVVSKLFYQQ QAKAGEKNSQ GTSDPLGPVY  180
VDVDLSNYPP LMDLSTVPLE EDNSNQQTVQ KSEHNCVQAN SHCEIKDKED THHPASEKVE  240
DQDSHPSQDP KWWEGESQFL MNSQQLAECM SICDEFLQSQ NSSGSGDEPG LLCCNVDRRE  300
NLEMVKGEEA PLLRGDRKGL HHFVVVVQLV FKYCNFCEAK V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882KKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955196.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK24e-87NAC8_ARATH; NAC domain-containing protein 8
TrEMBLK3YYT81e-179K3YYT8_SETIT; Uncharacterized protein
STRINGSi019444m1e-178(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.12e-88NAC family protein