PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do010830.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 804aa    MW: 85858.1 Da    PI: 4.5982
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do010830.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31e-21101431128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWk..atgkdkevlsk. 95 
                 lppG+ F P+de  v +yL +++ g +l+++  + + d +++ Pw+L  + ++++++ +fF++ + +  +g+r++r+ +  g W+  +t  + + l+  
  Do010830.1  10 LPPGILFAPEDEVAVEHYLLPRLLGWRLPVDGLVLDDDPLSAPPWELL-ERNGRKEDAFFFAEGQARCGKGTRQRRTCSgGGWWEgqKTCAEGDKLRVp 107
                 79****************************99999************7.445677899******************66615566532333333333336 PP

         NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++e+ + kk L f+ g   k  +t Wvmhey++
  Do010830.1 108 gggGQETSWRKKALNFHGGGGGKKGSTGWVMHEYAV 143
                 88777889*********99888888*********86 PP

2NAM73.45.6e-231803111128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atgkdkevlsk. 95 
                 lppGf F P+d ++v +yL +++ g+ l+l+  i + d +++ Pw+L +  ++ +++ +fF+  +  +++g+r++r  +  g+W+   t  d e l+  
  Do010830.1 180 LPPGFLFAPEDGDVVAHYLLRRILGQALPLDGLILDDDPLSSPPWELLE-RNGCKDDAFFFAMGQALNSKGSRQKRtCAGGGFWNgeRTCVDGEKLRVp 277
                 79****************************999**************73.34556799******************77789***933333344444436 PP

         NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +ge+ + kk L f +g ++   +t Wvmhey++
  Do010830.1 278 dldGGEVAWRKKALSFQEGGEKG--STGWVMHEYAI 311
                 78888999********9887766..8********86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-303161IPR003441NAC domain
PROSITE profilePS5100527.21210162IPR003441NAC domain
PfamPF023651.3E-1311142IPR003441NAC domain
SuperFamilySSF1019413.66E-30174330IPR003441NAC domain
PROSITE profilePS5100529.211180330IPR003441NAC domain
PfamPF023658.8E-15181310IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 804 aa     Download sequence    Send to blast
MAAAARAPDL PPGILFAPED EVAVEHYLLP RLLGWRLPVD GLVLDDDPLS APPWELLERN  60
GRKEDAFFFA EGQARCGKGT RQRRTCSGGG WWEGQKTCAE GDKLRVPGGG GQETSWRKKA  120
LNFHGGGGGK KGSTGWVMHE YAVTAPEDLA RSPLRLYHIR LSSFGRKQIG GMEVPRKLGL  180
PPGFLFAPED GDVVAHYLLR RILGQALPLD GLILDDDPLS SPPWELLERN GCKDDAFFFA  240
MGQALNSKGS RQKRTCAGGG FWNGERTCVD GEKLRVPDLD GGEVAWRKKA LSFQEGGEKG  300
STGWVMHEYA ITAPEHLAEA QLRLYRIRFS GHGKKRKRGD EESCADEAAP TAARRRVAED  360
ALLEFSTSEP SSQPICSSMV ITDADQQAAS VTIPANQDLT PGTTVDTSWD GFLDNFDSFY  420
IDELLRSIGD SPSTDPCVLP AVTDPGAYLH ADAASSSFSS QTVAAASPYN GVGVGLVTPS  480
APAIYASPVA ACKVLCSPQR LLEDGEVAEE KDVGAAPVAT EEFAETGSSP SSSSSSRSSG  540
PSSSSGCSSG GSCSDSSDSD SSDSDSDDDE SVTSSPAPAV LSKTDASPVT VPVSYTHLDV  600
YKRQPSSSSG CSSGGSCSDS SDSDSSDSDS DDDESVTSSP APAVLSKTDA SPVTVPCKVL  660
CSLPCSSSVF EDGEIEEDEK GGSASPATAE KLSDIPAPVL LRQPLEQHQA AQDHNLPLPQ  720
AEYRDLIARG HAKKRRLSNP ERQRAYEELE EMERNTKPIC DWIHPMQLRQ LGITQVEYAV  780
TSERRVPGRG CPVQRLLGLF LKAE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-12931112140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1332338GKKRKRG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002438091.10.0hypothetical protein SORBIDRAFT_10g007890
TrEMBLK3YY980.0K3YY98_SETIT; Uncharacterized protein
STRINGSi019248m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.22e-09NAC domain containing protein 50