PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do003598.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family G2-like
Protein Properties Length: 378aa    MW: 41040.4 Da    PI: 6.7789
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do003598.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.23.1e-123761125
     G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                kprlrWt eLH+rFv+av+qLGG++
  Do003598.1 37 KPRLRWTAELHDRFVDAVAQLGGPD 61
                79*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-103463IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-73762IPR006447Myb domain, plants
PfamPF143791.8E-23166211IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MFPSSKKQPS TGAVSSNDRS MCGQGDSGGL VLTTDPKPRL RWTAELHDRF VDAVAQLGGP  60
DIIPLIRALF FSLSEIQARE AAQGVWGSYR FSNSCSFRFI GSNLTAKIDD IIVSCIQYFQ  120
LFISIKIFFI SSNTLSNKPH SAMEMQRNVA SSSGVMGRTM NDRSVNVNEA LRIQMEVQRR  180
LHGELEVQKH LQMRVEAQGK YMQSILEKAY QALGSSDCAT WPAGYRSLGG SQAVLDIGGS  240
TSFSSVQDLQ CFYGGSSHMD QLMQMERPMD SFLTLGENFI GSAADKKGPN HCSSSGKSSM  300
IWAGEEQQQA KSGADQLQMG SSTTMEGAID VMDPITGLYE GAMSGDSMGS KGFEGPSSKL  360
EIKSPPQQAP VGSQRVRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo003598.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7280540.0KJ728054.1 Zea mays clone pUT6200 G2-like transcription factor (GLK34) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025810576.10.0myb family transcription factor APL-like
TrEMBLA0A1E5V2F80.0A0A1E5V2F8_9POAL; Myb family transcription factor APL
STRINGSi006865m1e-179(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25043890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.21e-50G2-like family protein