PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do001959.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 355aa    MW: 39297.1 Da    PI: 6.2776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do001959.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.21.3e-092713928127
         NAM  28 leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgk...rknratk..sgyWkatgkdkevlskkgelvglkktLvfy.. 109
                 ++  + i++vd++++ P+dL +          + ++ ++ wy++++r+ k+ +gk   +++ra++  +  W+a  + k+v++ +g    + + L +   
  Do001959.1  27 VDS-RYIHRVDVCSAAPEDLVAdlqpvpgtgvADDGYSNIWYYYCPRKFKNGQGKasgHRQRAIAggDTCWHAETRPKPVKDLDG---ATFRNLSYGrk 121
                 444.67**************755677787653222244589*******9999765444444544422667**********99444...45577888744 PP

         NAM 110 kgrapkgektdWvmheyr 127
                 +g++++ ++  W+m ey 
  Do001959.1 122 DGSSRSFNRMGWCMTEYD 139
                 57888889*********5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.5211158IPR003441NAC domain
SuperFamilySSF1019415.36E-1423157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MATEDPAPRT SDDASIALLR GLRAGAVDSR YIHRVDVCSA APEDLVADLQ PVPGTGVADD  60
GYSNIWYYYC PRKFKNGQGK ASGHRQRAIA GGDTCWHAET RPKPVKDLDG ATFRNLSYGR  120
KDGSSRSFNR MGWCMTEYDD KEEGGGGGDH VLCKIHRSSS SLARGKLKPS SSSTRPASSK  180
QTAQTSSGSK RKTTSDDHPQ APPNKIAHAQ ACNYACVDQE FCFLDHQVHE TLLTDDQMRM  240
PYCYQVQEPL LTHDQMRMPD CYQVQEPLLT HNQMMMPVEE EQVQQNPLFT MDEWLSVQRC  300
GLFTKNDLLT FQRYCEDGSC SPTTLSIMAQ LMIGCCGPPT ATAPPDAAFF QGLAF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002466176.13e-58hypothetical protein SORBIDRAFT_01g002900
TrEMBLK4AKJ42e-90K4AKJ4_SETIT; Uncharacterized protein
STRINGSi039417m6e-90(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4574632