PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do001398.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 310aa    MW: 34268.8 Da    PI: 8.2165
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do001398.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.21.7e-45211523128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.....tgkrknratksgyWkatgkdkevlsk. 95 
                 pGfrFhPt+eel+ +yLk+ ++gkkl++ ++i++v++y+++Pw+Lp  ++ +e+ewyfF++rd+k+a      g r++r+t++g+Wkatg+d++v ++ 
  Do001398.1  21 PGFRFHPTEEELLEFYLKQVAHGKKLKF-DIIPTVHLYRHDPWELPGLARIGEREWYFFVPRDRKQAggggcGGGRPSRTTERGFWKATGSDRAVRCAn 118
                 9**************************9.99***************8778899*************966555566*********************986 PP

         NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  Do001398.1 119 dPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 152
                 66777***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.79719180IPR003441NAC domain
SuperFamilySSF1019411.57E-5220180IPR003441NAC domain
PfamPF023656.9E-2421152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MERRSASSGG GGCGAAELEL PGFRFHPTEE ELLEFYLKQV AHGKKLKFDI IPTVHLYRHD  60
PWELPGLARI GEREWYFFVP RDRKQAGGGG CGGGRPSRTT ERGFWKATGS DRAVRCANDP  120
KRLIGLKKTL VYYEGRAPRG TKTDWVMNEY RLPDGAADSS SSGSSAAHKE DIVLCKIYRK  180
AVSLKELEQR VAMEELARAS ATPSASHNTG SPADSVSSSD QDAVVHQHQQ GDISMMMGIP  240
PASICMKKEV LAESSTPAVL RPATLSLPQL DVAKQPAQQQ EWMQDPFLTQ LRSPWMESWS  300
PYFASSVLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-471618011168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966508.11e-170PREDICTED: NAC domain-containing protein 67-like
TrEMBLK3XYI61e-170K3XYI6_SETIT; Uncharacterized protein
STRINGSi006994m1e-169(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-76NAC domain containing protein 36