PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV52706.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TCP
Protein Properties Length: 293aa    MW: 32401.5 Da    PI: 6.3454
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV52706.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.47.5e-36171211102
         TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsssg.. 88 
                 a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+q+ak ai +l+++            ++s+++++s + ++++++++  
  KZV52706.1  17 ATGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKALDWLIQKAKNAINQLNELppwnpstdnAVAPSSDSNPSSGELAKDQPEIHpe 115
                 589**************************************************************7766544442222233344444444443333332 PP

         TCP  89 ...kaaksaakskksqk 102
                    +           ++
  KZV52706.1 116 ntsN-----------SN 121
                 2221...........11 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.4E-3318124IPR005333Transcription factor, TCP
PROSITE profilePS5136932.052078IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MKGSEIVQVQ GGHIIRATGR KDRHSKVFTA KGPRDRRVRL SAHTAIQFYD VQDRLGYDRP  60
SKALDWLIQK AKNAINQLNE LPPWNPSTDN AVAPSSDSNP SSGELAKDQP EIHPENTSNS  120
NPSTSTCSFM HTGDVNSMKS LFPSNSMNFS DFPNGGIIPR ASFQAEDLGL SLYPLQADQS  180
GDNPGHSHPL LSSPSLMGFQ DSFQRADNWN SGNGNMEVIS QQGFFSQGFP FPQRDLLQSN  240
LFAHAWNERP FGAADHSFQQ PRARQSSDSG NHFDFGFQIP AQFYAEDGEG MNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100220.13e-77PREDICTED: transcription factor TCP10-like
TrEMBLB9MW224e-66B9MW22_POPTR; Uncharacterized protein
STRINGPOPTR_0013s12370.11e-65(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.31e-46TCP family protein