PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51966.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 194aa    MW: 22366.6 Da    PI: 9.8433
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51966.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.83.4e-33221232102
                   HHHHHHHHHCTG..........GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
  HSF_DNA-bind   2 Flkklyeilede..........elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                   Fl+k+y++le+e            ++++sw+++g+ fvv+ + ef++ vLp+yFkh+nf+SF+RQLn+YgFkk+ +++         weF+h++F++
    KZV51966.1  22 FLSKTYDLLETEeeerrgccggGGDRIVSWNSEGDGFVVWSPAEFSEVVLPRYFKHNNFSSFIRQLNTYGFKKSASKR---------WEFQHEKFQR 109
                   9*********777778888888999************************************************99988.........********** PP

                   XXXXXXXXXXXXXX CS
  HSF_DNA-bind  89 gkkellekikrkks 102
                   g+k+ll++i rkk 
    KZV51966.1 110 GSKHLLTEIGRKKC 123
                   ***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.103.0E-3517116IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004152.6E-4118121IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467851.18E-2620121IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.8E-3022121IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MVTSHAPPRA GVTRKIKCPA PFLSKTYDLL ETEEEERRGC CGGGGDRIVS WNSEGDGFVV  60
WSPAEFSEVV LPRYFKHNNF SSFIRQLNTY GFKKSASKRW EFQHEKFQRG SKHLLTEIGR  120
KKCEASSAFP PFLKPNTYSD KRKYKSTNAP TIGVLMEENK TLIREKQQLQ LQIAYFKNLE  180
TELRRCLPLY TACN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B6e-17712115129Heat shock factor protein 1
5d5v_B6e-17712115129Heat shock factor protein 1
5d5v_D6e-17712115129Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004232865.17e-68PREDICTED: heat stress transcription factor B-2a-like
SwissprotQ963201e-35HSFB1_ARATH; Heat stress transcription factor B-1
TrEMBLA0A022RWP32e-76A0A022RWP3_ERYGU; Uncharacterized protein
STRINGSolyc02g078340.2.12e-67(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107071823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.14e-36heat shock factor 4