PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV46392.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 346aa    MW: 39005.1 Da    PI: 10.3382
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV46392.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.15.2e-1453143186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++  ++L+ea  ++   l+rg+l++++W+ev++++      + +++r+ +qCk++++ ++k+yk +k    + + + sst+p+fd+l+
  KZV46392.1  53 CWSEDASRTLVEAWGSRYLVLNRGNLRQKHWQEVADAVnsvhgDSFKLRRTDVQCKNRIDTIKKKYKIEKSKVVQSNGRYSSTWPHFDSLD 143
                 7*************************************999999999***********************9999999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.1E-2451145No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSPSRTPSPA LSSAASPISG DDKNVHSSPS SPAKPEPPHP ATRTSVFPTR EDCWSEDASR  60
TLVEAWGSRY LVLNRGNLRQ KHWQEVADAV NSVHGDSFKL RRTDVQCKNR IDTIKKKYKI  120
EKSKVVQSNG RYSSTWPHFD SLDSLIGDTF VKTNNSNSNG HRRNLRRRVS QSPEASPSPP  180
RLPGTLTLYR NISPDRIPHI VKDPEPGQLL RGPWSVPVGP RTKRSGPPSL TERNFSVMAA  240
AAAAMKAKEE EEEDDEDSDD WGVRPPAVGI KRKGVTAVEG CLKLAEAIGR LGSIYERVEE  300
AKQRQMLELE KQRMQFAKDL EIQRMKLFMV QLEKFKRVKS EQRFTW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083009.11e-114PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A022RMF31e-107A0A022RMF3_ERYGU; Uncharacterized protein
STRINGSolyc12g010890.1.14e-80(Solanum lycopersicum)
STRINGPGSC0003DMT4000201946e-80(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-34sequence-specific DNA binding transcription factors