PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26970.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 480aa    MW: 54865.3 Da    PI: 7.7941
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26970.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix85.56.6e-2786162176
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsess 76 
                 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+keg+ +r+++++
  KZV26970.1  86 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHAYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKH 162
                 8*************************************899*****************************9865543 PP

2trihelix54.62.9e-17347427284
    trihelix   2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                 W++ ev  Li++r+ +e+++++ g ++++ Wee++ km+  g+e s  +C+ekwe++n+   k+ + +kk  s++   c+y+++
  KZV26970.1 347 WPEGEVSRLIQLRNGVESKFQQsGISEEAMWEEIATKMACSGYEMSGLRCREKWESINNNVLKCYKKRKKT-SRNI--CSYYQD 427
                 *********************835699**************************************999984.5555..999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.07379144IPR017877Myb-like domain
PfamPF138375.0E-1886159No hitNo description
CDDcd122039.14E-1986151No hitNo description
PfamPF138371.4E-12346429No hitNo description
CDDcd122031.24E-16347415No hitNo description
PROSITE profilePS500905.935347404IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MEDHPYGMAD LGQYRRALCQ PPQQGFLSSH WVLPCGMIMF CADNSTASAV PIGDNTTCVG  60
VTASSGGGGG GGGGGGGRGD SIVSGRWPRQ ETLTLLEIRS RLDSKFKEAN QKGPLWDEVS  120
RIMSEEHAYQ RSGKKCREKF ENLYKYYKKT KEGKAGRQDG KHYRFNPNVS KISISSAKNK  180
ESYPGFSLSN SCEYDPTSSD DSENDPEIGD NDPNRRKRRG KRGWKVKIKD FIDIQMKKLM  240
DKQEAWIEKM METNEDREKE RILREEEWRK LDAERIERER NLWANKRALI EARDASLIDT  300
LHKMTRMESR SPQQQVMMMD NQNLSENYQI DDGSETINNH PKSDVFWPEG EVSRLIQLRN  360
GVESKFQQSG ISEEAMWEEI ATKMACSGYE MSGLRCREKW ESINNNVLKC YKKRKKTSRN  420
ICSYYQDYES FCSQGGGSYC DHTQLNRSSN SSVVANDTGN GIRDICLRYY EGDVHGRIVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411415KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094408.11e-151PREDICTED: trihelix transcription factor PTL
SwissprotQ9LZS08e-93PTL_ARATH; Trihelix transcription factor PTL
TrEMBLF6HKI21e-137F6HKI2_VITVI; Putative uncharacterized protein
STRINGVIT_08s0007g03820.t011e-136(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30632451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.17e-86Trihelix family protein