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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV24601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | Trihelix | ||||||||
Protein Properties | Length: 924aa MW: 104993 Da PI: 5.3413 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 63.5 | 4.9e-20 | 665 | 742 | 1 | 71 |
trihelix 1 rWtkqevlaLiearremeerlr.rg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 +Wt ++v++Li+a++++++++ ++ ++ k++W+++sk m erg+ +sp+qC++k+++lnk+yk++++ ++ KZV24601.1 665 KWTSEMVKLLITAVSYVGDDSFsESpegerrNRVKGKWRAISKCMIERGYFVSPQQCEDKFNDLNKKYKRLNDAVGST 742 7**************8866544132222222699**************************************987775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.60.120.200 | 3.1E-10 | 34 | 128 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF56112 | 2.49E-68 | 105 | 400 | IPR011009 | Protein kinase-like domain |
PROSITE profile | PS50011 | 31.51 | 121 | 412 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 1.5E-34 | 122 | 397 | IPR000719 | Protein kinase domain |
Gene3D | G3DSA:3.30.200.20 | 1.5E-15 | 129 | 195 | No hit | No description |
Gene3D | G3DSA:1.10.510.10 | 3.8E-43 | 197 | 415 | No hit | No description |
SuperFamily | SSF56112 | 6.93E-23 | 436 | 567 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:1.10.510.10 | 2.5E-18 | 475 | 567 | No hit | No description |
Pfam | PF00069 | 6.8E-12 | 475 | 551 | IPR000719 | Protein kinase domain |
Pfam | PF13837 | 5.3E-18 | 665 | 741 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 924 aa Download sequence Send to blast |
MSMVYDNWER LVAAVLKREE LREIALCPSF SSSSSFSSHL PSDPSPQRVS VASSATGVIA 60 GVVAAGAARL YSAPSLALAW YRRRKPGDNF FDVSAEGDPG GDLGHLKSFS LRELKAASDN 120 FSQKNFLGSS GFGKLYKGQL ADGSLVAVRR LKKPHGEIQF LTELEISHIA VHQNLLRLIG 180 FCNTAKEWLI VYPYMANGSV ASWLRERPES QAPLDWPIRK RIALGSARGL AYLHDHCDPK 240 IIHRDVKAAS ILLDEDFEAV VGDFRIAKLM DYKDTHVTTA VVGTFGHIAT EYLSTGKCSE 300 KTDAFSYGVM LLELITGQRP FDLAWLANVD DVMLLNWVSH ILDWVRGLLK EKKWETLVDA 360 DLQGNYVDEE VEQLIQLALL CTKSSPWERP KMSEVVRMLE GDGLAERWEE WQKEDMFRQE 420 FNHSHQPTAE EDPEGHQYPC MANGSVASCL RERPESQAPL DWSIRKRKAL RSYFKAANIF 480 LDEDFEAYVG DFGLAKLMDY KDTHVTTDVT GTTGHVDPEY LSTGKCSEKT DDFSYGVMLL 540 ELITCQRAFD LARLANDDDV MLLDWVRGHF LEKKLGTLVD GELRRHTEDM DSLLQELGNI 600 LPEEPLVLQE SQPSMQEPQQ RDHCSYPSLL AHPNQVPGPG LYFGCDNGLL DGGILSSEPL 660 WQRIKWTSEM VKLLITAVSY VGDDSFSESP EGERRNRVKG KWRAISKCMI ERGYFVSPQQ 720 CEDKFNDLNK KYKRLNDAVG STDSRIVVEN PALIDALDIR VENKEEVRKI LMCKQLFYQE 780 MFSYHNRNRN HIPQDESLRL SLLSALRGKI KQVSPNEIEE ITAVKRQKQG EDQAVSIPDT 840 QNSTEVCEKD HSPAIISRLL RVQKMKKQIQ DEKIELEKKR LGWLKSNQLE DMELQELKLE 900 NEVLKLENER LMLELTNWEI RANN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3tl8_H | 0.0 | 82 | 589 | 1 | 338 | BRASSINOSTEROID INSENSITIVE 1-associated rece |
3tl8_G | 0.0 | 82 | 589 | 1 | 338 | BRASSINOSTEROID INSENSITIVE 1-associated rece |
3tl8_D | 0.0 | 82 | 589 | 1 | 338 | BRASSINOSTEROID INSENSITIVE 1-associated rece |
3tl8_A | 0.0 | 82 | 589 | 1 | 338 | BRASSINOSTEROID INSENSITIVE 1-associated rece |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092409.1 | 0.0 | PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like | ||||
Swissprot | Q94F62 | 0.0 | BAK1_ARATH; BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | ||||
TrEMBL | A0A0D2S326 | 0.0 | A0A0D2S326_G | ||||
TrEMBL | E4MXU7 | 0.0 | E4MXU7_EUTHA; mRNA, clone: RTFL01-35-E21 | ||||
TrEMBL | V4MLY9 | 0.0 | V4MLY9_EUTSA; Uncharacterized protein | ||||
TrEMBL | A0A022R432 | 0.0 | A0A022R432_ERYGU; Uncharacterized protein | ||||
TrEMBL | R0H4E8 | 0.0 | R0H4E8_9BRAS; Uncharacterized protein | ||||
STRING | fgenesh2_kg.7__780__AT4G33430.1 | 0.0 | (Arabidopsis lyrata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76870.1 | 5e-45 |