PlantTFDB
Plant Transcription Factor Database
v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24601.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 924aa    MW: 104993 Da    PI: 5.3413
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24601.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.54.9e-20665742171
    trihelix   1 rWtkqevlaLiearremeerlr.rg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 +Wt ++v++Li+a++++++++  ++      ++ k++W+++sk m erg+ +sp+qC++k+++lnk+yk++++  ++ 
  KZV24601.1 665 KWTSEMVKLLITAVSYVGDDSFsESpegerrNRVKGKWRAISKCMIERGYFVSPQQCEDKFNDLNKKYKRLNDAVGST 742
                 7**************8866544132222222699**************************************987775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.120.2003.1E-1034128IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF561122.49E-68105400IPR011009Protein kinase-like domain
PROSITE profilePS5001131.51121412IPR000719Protein kinase domain
PfamPF000691.5E-34122397IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.201.5E-15129195No hitNo description
Gene3DG3DSA:1.10.510.103.8E-43197415No hitNo description
SuperFamilySSF561126.93E-23436567IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.102.5E-18475567No hitNo description
PfamPF000696.8E-12475551IPR000719Protein kinase domain
PfamPF138375.3E-18665741No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 924 aa     Download sequence    Send to blast
MSMVYDNWER LVAAVLKREE LREIALCPSF SSSSSFSSHL PSDPSPQRVS VASSATGVIA  60
GVVAAGAARL YSAPSLALAW YRRRKPGDNF FDVSAEGDPG GDLGHLKSFS LRELKAASDN  120
FSQKNFLGSS GFGKLYKGQL ADGSLVAVRR LKKPHGEIQF LTELEISHIA VHQNLLRLIG  180
FCNTAKEWLI VYPYMANGSV ASWLRERPES QAPLDWPIRK RIALGSARGL AYLHDHCDPK  240
IIHRDVKAAS ILLDEDFEAV VGDFRIAKLM DYKDTHVTTA VVGTFGHIAT EYLSTGKCSE  300
KTDAFSYGVM LLELITGQRP FDLAWLANVD DVMLLNWVSH ILDWVRGLLK EKKWETLVDA  360
DLQGNYVDEE VEQLIQLALL CTKSSPWERP KMSEVVRMLE GDGLAERWEE WQKEDMFRQE  420
FNHSHQPTAE EDPEGHQYPC MANGSVASCL RERPESQAPL DWSIRKRKAL RSYFKAANIF  480
LDEDFEAYVG DFGLAKLMDY KDTHVTTDVT GTTGHVDPEY LSTGKCSEKT DDFSYGVMLL  540
ELITCQRAFD LARLANDDDV MLLDWVRGHF LEKKLGTLVD GELRRHTEDM DSLLQELGNI  600
LPEEPLVLQE SQPSMQEPQQ RDHCSYPSLL AHPNQVPGPG LYFGCDNGLL DGGILSSEPL  660
WQRIKWTSEM VKLLITAVSY VGDDSFSESP EGERRNRVKG KWRAISKCMI ERGYFVSPQQ  720
CEDKFNDLNK KYKRLNDAVG STDSRIVVEN PALIDALDIR VENKEEVRKI LMCKQLFYQE  780
MFSYHNRNRN HIPQDESLRL SLLSALRGKI KQVSPNEIEE ITAVKRQKQG EDQAVSIPDT  840
QNSTEVCEKD HSPAIISRLL RVQKMKKQIQ DEKIELEKKR LGWLKSNQLE DMELQELKLE  900
NEVLKLENER LMLELTNWEI RANN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3tl8_H0.0825891338BRASSINOSTEROID INSENSITIVE 1-associated rece
3tl8_G0.0825891338BRASSINOSTEROID INSENSITIVE 1-associated rece
3tl8_D0.0825891338BRASSINOSTEROID INSENSITIVE 1-associated rece
3tl8_A0.0825891338BRASSINOSTEROID INSENSITIVE 1-associated rece
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092409.10.0PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
SwissprotQ94F620.0BAK1_ARATH; BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
TrEMBLA0A0D2S3260.0A0A0D2S326_G
TrEMBLE4MXU70.0E4MXU7_EUTHA; mRNA, clone: RTFL01-35-E21
TrEMBLV4MLY90.0V4MLY9_EUTSA; Uncharacterized protein
TrEMBLA0A022R4320.0A0A022R432_ERYGU; Uncharacterized protein
TrEMBLR0H4E80.0R0H4E8_9BRAS; Uncharacterized protein
STRINGfgenesh2_kg.7__780__AT4G33430.10.0(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76870.15e-45