PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24284.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family AP2
Protein Properties Length: 440aa    MW: 48482.2 Da    PI: 8.124
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24284.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-16154203155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  KZV24284.1 154 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHVAARAYDRAAIKFRG 203
                 78*******************......55************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.18E-15154213IPR016177DNA-binding domain
PfamPF008471.5E-8154203IPR001471AP2/ERF domain
CDDcd000184.46E-24155213No hitNo description
SMARTSM003807.1E-32155217IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-17155211IPR001471AP2/ERF domain
PROSITE profilePS5103217.477155211IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-5246291IPR016177DNA-binding domain
CDDcd000185.11E-12246291No hitNo description
SMARTSM003801.5E-9247295IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MLDLNDVAAS FFTGDEFQPE KTATGDGDSV ASTSTSTTNN GAVDDREDSN SSTRRNTTVL  60
STLNFSILNG NVVEIDDFVD KHELQLFPGE TESLASLYSP PAASRSKCWL NLSLPEVSVV  120
GGAEVGIFKA QVPLNRLQQP AVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY  180
LGGFDTAHVA ARAYDRAAIK FRGVDADINF NISDYEEDMK QMKNLTKEEF VHILRRQSAG  240
FSRGSSKYRG VTLHACGRWE ARMGQFLGKK AYDKAAIKCN GSETVTNFEP SIYQREISTC  300
ARYVGSSSSL DLNLGISLAS ISPIGHEANG NLQLPYANCE MPDRKIIEVE NSSALPHGLE  360
MATKYPHMLT GGFATSNKER GIVRDTEANP FRGSHNWPWK MQNDGVAKPV SLLSTAASSG  420
FPSSIDIPYP RLLSKVFNDK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24284.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834706.11e-134PREDICTED: ethylene-responsive transcription factor RAP2-7 isoform X2
SwissprotQ9SK038e-86RAP27_ARATH; Ethylene-responsive transcription factor RAP2-7
TrEMBLA0A2Z7AQW50.0A0A2Z7AQW5_9LAMI; Uncharacterized protein
STRINGMigut.F02018.1.p1e-129(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59124116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.22e-85related to AP2.7