PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 147aa    MW: 16455.2 Da    PI: 6.5432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24224.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-201263256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +l+g+
  KZV24224.1 12 KYRGIRRRP-WGKFAAEIRDPNRNG--ARLWLGTFETAEEAARAYDRAAYALRGH 63
                8********.**********96665..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.791270IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-321271IPR001471AP2/ERF domain
CDDcd000184.83E-201272No hitNo description
PfamPF008471.6E-141263IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-231271IPR016177DNA-binding domain
SMARTSM003807.5E-341276IPR001471AP2/ERF domain
PRINTSPR003671.6E-111324IPR001471AP2/ERF domain
PRINTSPR003671.6E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MESNKGQQNE VKYRGIRRRP WGKFAAEIRD PNRNGARLWL GTFETAEEAA RAYDRAAYAL  60
RGHLAILNFP NDGHYRDNSP APARYNPPQP AAPPSQISDY ASSSSYAAAR GDLLSDEKVV  120
ELEYLDNKLL EDLLESQVQF GNGSNKI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2812721474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24224.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006443851.13e-47ethylene-responsive transcription factor ERF098
RefseqXP_006480088.13e-47ethylene-responsive transcription factor ERF098-like
RefseqXP_022959671.12e-47ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC53e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2Z7AQR11e-103A0A2Z7AQR1_9LAMI; Uncharacterized protein
STRINGXP_006480088.11e-46(Citrus sinensis)
STRINGXP_006443851.11e-46(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-29ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]