PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15174.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRAS
Protein Properties Length: 507aa    MW: 58903.9 Da    PI: 4.549
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15174.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS99.93.7e-311265062374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL++ Aea++++++ l   +++++ + ++p g  + R+  y+ + L +        l+     +    +  s+  aa+k+f+++ P+ +f+hl+aN+
  KZV15174.1 126 LHLLVAYAEAIDKQETLLSGVIVEHMIKKVNPVGGIVDRIMYYMFRHLYKESDY----LV-----K----ECLSNFYAAFKAFYQILPYGRFAHLVANS 211
                 79*****************************************98766554443....22.....2....23678999********************* PP

        GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.vak.rledlel 191
                 aI e + ++ + +H+ Dfdi++G+Q   Ll+++ + +    ++R+  v   e g     s  + eet+ r+ + A+++g+++  + +  ++  +++ ++
  KZV15174.1 212 AIIENMPSHvDIIHVFDFDIGEGIQISFLLEEMKDHR--CKEVRVISVRLGEDGeffshSIWNFEETKIRICNEARSCGIDMTVEEVgFMDlGCKMKNI 308
                 *******998999********************9654..334555555544443445559999**********************98322223333344 PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrll..desvsles...erdevLklvkslsP....kvvvvveqe...adh.nsesFlerflealeyysalfdsleaklpr 277
                 e+    ++   + n+++ l ++   +++ ++ +     +++L+ v++ +      +++  + +    ++ n  ++ + + + ++ + a+++sle ++p 
  KZV15174.1 309 EKECYGRKSWHIFNCMVGLPHMGriRSKKCVLKflqVAKDFLQNVRNCETgfskGIITYGDGDtwcGNMtNCVDYTTFLDSNVRRFRAFLESLEFSFPY 407
                 44444449999******99998733223333334547889*****98654222279*******4443333555888888899****************9 PP

        GRAS 278 es.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve...eesgslvlgWkdrpLvsvS 371
                    e+r+ +E  ++++  +++   ++ e   ++++ +   + +e+ G++ ++lsek + +a+ ++r+ + +  y v    e+++++ l W++ pLv vS
  KZV15174.1 408 RLgEARVALESLFVAPYFSSITLERKWE---ENKQCGGVDQLVESLGMEGLRLSEKCMLEASEMVREGDdNSPYGVRfmsEKKNEMGLHWRGTPLVRVS 503
                 9868888888887777777766666665...8888899999**************************99666698887779999*************** PP

        GRAS 372 aWr 374
                 +W+
  KZV15174.1 504 CWK 506
                 **8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098514.00699482IPR005202Transcription factor GRAS
PfamPF035141.3E-28126506IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MSDMYDIDQC IWPHSNNSDS FFMDDDEYRY AFSPPFFATD ASLEISSTMQ QYLGSIFSDE  60
CMEFPRLVEE VHEDYSREDL QIDFDEFDHI FEDDMDHDRA MDVPHASMQI SQLLEEEEID  120
SEGCLLHLLV AYAEAIDKQE TLLSGVIVEH MIKKVNPVGG IVDRIMYYMF RHLYKESDYL  180
VKECLSNFYA AFKAFYQILP YGRFAHLVAN SAIIENMPSH VDIIHVFDFD IGEGIQISFL  240
LEEMKDHRCK EVRVISVRLG EDGEFFSHSI WNFEETKIRI CNEARSCGID MTVEEVGFMD  300
LGCKMKNIEK ECYGRKSWHI FNCMVGLPHM GRIRSKKCVL KFLQVAKDFL QNVRNCETGF  360
SKGIITYGDG DTWCGNMTNC VDYTTFLDSN VRRFRAFLES LEFSFPYRLG EARVALESLF  420
VAPYFSSITL ERKWEENKQC GGVDQLVESL GMEGLRLSEK CMLEASEMVR EGDDNSPYGV  480
RFMSEKKNEM GLHWRGTPLV RVSCWKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15174.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095221.11e-150nodulation-signaling pathway 2 protein-like
TrEMBLA0A2Z7A1060.0A0A2Z7A106_9LAMI; Nodulation-signaling pathway 2 protein-like
STRINGMigut.J00120.1.p1e-130(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-11GRAS family protein