PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15173.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRAS
Protein Properties Length: 505aa    MW: 57726.2 Da    PI: 4.4694
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15173.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS147.21.5e-451435042373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL + Aea+++g++ la+ l +  +e  s  g++m+R+a+ +        +r     yk  ++++ + ++  + + a++++++  P+ +f+hltaN+
  KZV15173.1 143 HHLLKAYAEAMENGEKDLADVLAKSTNEKTSAMGSTMERVAFSL--------FR-----YKEKQTEQMQLESINNLVEAFRVLYQGLPVGRFAHLTANS 228
                 79999************************************964........45.....45555666666668889999******************** PP

        GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL.. 194
                 aI  a+ ++ + vH+iDfdi++G+QW++L+++L+ ++++   l +T v+   +      ++eet++rL+  A++ + +++ +    k++edl ++eL  
  KZV15173.1 229 AIIGAMPSDaDLVHVIDFDIGEGIQWAPLMESLSWKNKS---LMLTSVKLDGERtsTFCNIEETKKRLQGHAKQYNCRLQVEE---KSMEDL-VNELtr 320
                 ******9987999*********************98655...888888875554557789********************987...667777.555533 PP

        GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqeadh..nse.sFlerflealeyysalfdsleaklpres.eer 282
                 r+k+    +  l+ n+++ l ++ +++  ++    e+Lk+ k+l +k   ++++ + e  +  n+  s+   f + l++y alf+sle++lp+    +r
  KZV15173.1 321 RMKKrgeeKNWLVFNCMVGLPHMARRRPRSQ--VLEFLKVAKELLSKfagILTLGDGEEGYglNTCsSYQSFFDKLLRHYQALFESLEKNLPSYLaAAR 417
                 22225555888************95555444..599********9876669***99886654466426666667789***************987799* PP

        GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 +++E  +l++ ++           ++ e+++k ++  ++ G++ ++ls++  ++a+ ++++ ++  ++v+    +++++vl Wkd pLv vS W
  KZV15173.1 418 TTIESLFLAPFLSPFDWF------QDWEEKMKSQNVQDRIGLEGLELSKESLAEAREMVNEREGP-FKVKvegYREHEMVLEWKDTPLVRVSTW 504
                 ******999987765444......455566777889999***********************966.9998445559****************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098521.169116483IPR005202Transcription factor GRAS
PfamPF035145.4E-43143504IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MLQPGILMPS GPIFDLTFSN QYVNCNQEME FCDIDYHDFS SSFASHSESS VISSNSCDQT  60
MFQDEFLIHH IMSSSMEGVE TIFSSEDLME VCEWINETDH DSPSGDQESS PCISFESDEN  120
SDVGLSLSLP ETEMELDDEL RLHHLLKAYA EAMENGEKDL ADVLAKSTNE KTSAMGSTME  180
RVAFSLFRYK EKQTEQMQLE SINNLVEAFR VLYQGLPVGR FAHLTANSAI IGAMPSDADL  240
VHVIDFDIGE GIQWAPLMES LSWKNKSLML TSVKLDGERT STFCNIEETK KRLQGHAKQY  300
NCRLQVEEKS MEDLVNELTR RMKKRGEEKN WLVFNCMVGL PHMARRRPRS QVLEFLKVAK  360
ELLSKFAGIL TLGDGEEGYG LNTCSSYQSF FDKLLRHYQA LFESLEKNLP SYLAAARTTI  420
ESLFLAPFLS PFDWFQDWEE KMKSQNVQDR IGLEGLELSK ESLAEAREMV NEREGPFKVK  480
VEGYREHEMV LEWKDTPLVR VSTWM
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15173.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095222.10.0nodulation-signaling pathway 2 protein-like
TrEMBLA0A2Z7A2210.0A0A2Z7A221_9LAMI; Nodulation-signaling pathway 2 protein-like
STRINGMigut.J00119.1.p1e-141(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-22GRAS family protein