PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca5170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family C2H2
Protein Properties Length: 440aa    MW: 49229.1 Da    PI: 9.9044
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca5170.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-05209231223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +C++Cg++F  ++nL+ H+ + H
  Dca5170.1 209 SCTHCGEVFMKPDNLELHLAVrH 231
                8*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.6208236IPR007087Zinc finger, C2H2
PROSITE patternPS000280208231IPR007087Zinc finger, C2H2
SuperFamilySSF563991.06E-18233438No hitNo description
Gene3DG3DSA:3.90.228.101.2E-8236437IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MAKNTSTKPT KEIHKTRKGK QQQQQQLPSW AVMRNILTCK HLEVEPPLQQ QQQQQQQPSP  60
QNKKHKQKTT TTTTTTTTTT TPPPPKSKKM RCSGSLCNNT KVMHRPEQQN QQQQQQQQSP  120
SPETRKVKNT PTSTPSSSSH EGSNRSFNTT PISSSLTTEI KGTNHNNSNN YSVKGMPFRR  180
LTGCYECRMI VDPVLSFTRD PSLRSTICSC THCGEVFMKP DNLELHLAVR HAVSELGPDD  240
TSKNIVEIIF QSSWLMKQIP VCKIDRILKV HNTQRTINKF EEYRDLIKFK ATNLPKKHPR  300
CIADGNELLR FYCTTFKCSL GLNGSSNLCN SIPHCNICSI IKNGFKSLGG PTHEKGILTT  360
ASSGRAHEQA KVGPDGVERR AMLVCRVIAG RVRKTPAEGP SEECDSMAGE TTGVYSNLDE  420
LYVFNPRAIL PCFVVIYGGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15966PQNKKHKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010692561.10.0PREDICTED: uncharacterized protein LOC104905404
TrEMBLA0A0K9QQH80.0A0A0K9QQH8_SPIOL; Uncharacterized protein
STRINGXP_010692561.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.17e-95C2H2-like zinc finger protein