PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca37302.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family C2H2
Protein Properties Length: 269aa    MW: 30024.2 Da    PI: 7.0334
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca37302.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.8e-05158178323
                 ETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                 C++Cgk F ++ ++++H+++ H
  Dca37302.1 158 CNKCGKAF-QQAEMEKHMKVfH 178
                 ********.**********988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003551303866IPR015880Zinc finger, C2H2-like
SMARTSM003552.7156178IPR015880Zinc finger, C2H2-like
SMARTSM00355130207235IPR015880Zinc finger, C2H2-like
SMARTSM00355160244266IPR015880Zinc finger, C2H2-like
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MEKHMKVFHE PHQCSCGVIL EKEEMVQHQS TVCPMRMITC RFCGDVVPAG SSPMDMRDHL  60
RGLSEHESLC GSRTAPCDSC GRXISLHIQE NSNQVQQAGL STSSLEADVA ECGNCKHFIP  120
SRSIALHEAY CRRHNVICQH SGCGVVLRVE DAKNHVHCNK CGKAFQQAEM EKHMKVFHEP  180
HQCSCGVILE KEEMVQHQST VCPMRMITCR FCGDVVPAGS SPMDMRDHLR GLSEHESLCG  240
SRTAPCDSCG RSVMLKEMEI HRIAVHPNN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021765555.11e-110uncharacterized protein LOC110730092
TrEMBLA0A0K9RU251e-107A0A0K9RU25_SPIOL; Uncharacterized protein
STRINGXP_010677397.11e-109(Beta vulgaris)