PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca13203.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family G2-like
Protein Properties Length: 150aa    MW: 16859.5 Da    PI: 4.1018
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca13203.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like414.1e-136895229
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtP 29
                prlrWtp+LH rFv+ave+LGG+e   P
  Dca13203.1 68 PRLRWTPDLHLRFVHAVERLGGQETSKP 95
                8**********************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.7E-116494IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MEGSVNQSGE CSKTNLSEQG DDEDESDEND EEMTYNNNNG GSSSNSTVDE NDEKPSTTVR  60
PYVRSKTPRL RWTPDLHLRF VHAVERLGGQ ETSKPIHGLP ITMDYCTIPT KSSYQPILLE  120
QTPMDGLDFD MIIINILDDE SSTFKDLIIK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092813.13e-31two-component response regulator ORR22
RefseqXP_020552483.12e-32putative Myb family transcription factor At1g14600
RefseqXP_022747677.13e-32probable transcription factor KAN4
TrEMBLA0A2P5B1203e-32A0A2P5B120_PARAD; Homeodomain-like
STRINGXP_010092813.11e-30(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-20G2-like family protein