PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_032196
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family B3
Protein Properties Length: 291aa    MW: 33062.7 Da    PI: 8.6264
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_032196genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.75.6e-15184267198
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ffkvl     +k + l +p +++++++++k++   ++l++   ++Wev++  +++    v+++GW++Fvk+++L+egDf+vF+  g++ f  +v +f 
  DCAR_032196 184 FFKVL--IGEFKDS-LNVPATYMQQYNSIKNG--AMRLRN-GENEWEVEV--DGR----VIKSGWNKFVKDHKLCEGDFLVFTALGEMFF--NVAIFG 267
                  66666..5555555.99*********999777..588877.779******..555....79**********************9998888..887775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.9E-19178270IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.321181269IPR003340B3 DNA binding domain
SuperFamilySSF1019361.88E-16182269IPR015300DNA-binding pseudobarrel domain
CDDcd100172.79E-11183266No hitNo description
SMARTSM010191.4E-12184269IPR003340B3 DNA binding domain
PfamPF023629.9E-11184266IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MESQYDLGMI GWLVCTVILG GLATVYGFLK KANKNYWSSS SSCFSLGEIV WTIRSVFKNL  60
THVVDSCSCC SHGVNSDCVD FQFSSWEERI ISAKKRERKV GYFLKNIGSN KYTLAVIGKQ  120
SIVGHMSYDV YGSFARNHAS HLPPRQDLKW NTKREVVDWL STLITVPNTE VVQQVQYAKE  180
GNSFFKVLIG EFKDSLNVPA TYMQQYNSIK NGAMRLRNGE NEWEVEVDGR VIKSGWNKFV  240
KDHKLCEGDF LVFTALGEMF FNVAIFGQNG RIKEYPWFHA FNPDGRVVYA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31650.12e-12B3 family protein