PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_032185
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 279aa    MW: 30212.6 Da    PI: 7.2483
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_032185genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021101123123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C+ C++sF++   L  H  +H
  DCAR_032185 101 YQCKTCDRSFPSFQALGGHRASH 123
                  9***********99999998887 PP

2zf-C2H213.50.00022188210123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++Cg  F++   L  H+r+H
  DCAR_032185 188 HECSICGAEFTSGQALGGHMRRH 210
                  78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.87E-9100123No hitNo description
PROSITE profilePS5015711.759101128IPR007087Zinc finger, C2H2
SMARTSM003550.032101123IPR015880Zinc finger, C2H2-like
PfamPF139126.0E-12101125IPR007087Zinc finger, C2H2
PROSITE patternPS000280103123IPR007087Zinc finger, C2H2
SuperFamilySSF576673.87E-9183210No hitNo description
PfamPF139125.4E-13187212IPR007087Zinc finger, C2H2
SMARTSM003550.01188210IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.723188210IPR007087Zinc finger, C2H2
PROSITE patternPS000280190210IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGSEEYYNMM MIKGKRSKRQ RQLLAASSSA LALTMAASSS STSSSDQQFN NNICVMNCDD  60
DKNTTQVEQD TANCLILLAQ GGQSPQNLPT TTTAVKDSSM YQCKTCDRSF PSFQALGGHR  120
ASHKRPKPGS TTDPALINHH ESSSSMFNHD TNNTYTTNTT LSLQISPSRP DSCSVKISNT  180
TKSSSKVHEC SICGAEFTSG QALGGHMRRH RSSLLPRASP NHESDNEPKK PAAANVFSLD  240
LNLPAPEDMD QPIESKFPFA MNEQVIVFSP SALVDCHL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017228738.10.0PREDICTED: zinc finger protein ZAT5-like
TrEMBLA0A175YAH40.0A0A175YAH4_DAUCS; Uncharacterized protein
STRINGXP_010098815.11e-60(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.14e-47C2H2 family protein