PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_030929
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 331aa    MW: 37138.6 Da    PI: 6.9915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_030929genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.19.1e-083179155
          AP2  1 sgykGVrwdkkrgr....WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s+y GV++ + +      WvA Ird         + l +++t+eeAa a ++a+ +l+g
  DCAR_030929 31 SRYMGVSRTR-SEYfggpWVAKIRD---------VCLDTYDTEEEAALAFDHAAFRLRG 79
                 6899998655.4557899****999.........5599*******************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.83E-183188No hitNo description
SuperFamilySSF541718.5E-113187IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-133288IPR001471AP2/ERF domain
SMARTSM003806.5E-123293IPR001471AP2/ERF domain
PROSITE profilePS5103214.5393287IPR001471AP2/ERF domain
SuperFamilySSF542771.35E-14241327No hitNo description
PROSITE profilePS5174518.252242324IPR000270PB1 domain
SMARTSM006669.5E-16242324IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2405.2E-15242322No hitNo description
PfamPF005643.3E-14243323IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDDDYSFMVK ALNQVIGNSG EPTLTSSARN SRYMGVSRTR SEYFGGPWVA KIRDVCLDTY  60
DTEEEAALAF DHAAFRLRGR NAKLNFPNCS SKGELMSPDC PLSTFEKLFK GWSDAKDSGS  120
VSCSGGLGSL QSNKEESDIF QSQGGAHAFQ HYPNVELDWD AIMHQDRVAV ENQVSRSTLK  180
RKCRGLGIKD WRRGKQSIKG NMSSNLRRRS RDDEQAEKNF HSGLPPGEKA PAVDHISQTL  240
NEVTVRAMYN GVTIRFDLSD SSGIAELENN VIERLHLERE SFSIKYQDDE VIWILIACDK  300
DVRKCIEISR SLKRTSITLL VDPPINHHKQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017225466.11e-127PREDICTED: ethylene-responsive transcription factor ERF057-like
TrEMBLA0A175YJD10.0A0A175YJD1_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12836219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-17NIN like protein 7