PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_030924
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family Nin-like
Protein Properties Length: 180aa    MW: 20241.3 Da    PI: 10.4387
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_030924genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK48.22.1e-15241645
       RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45
                 +le++sk+F  p++dAAk+ gv+ ++ KriCR +GIkRW 
  DCAR_030924  2 NLENVSKHFGRPLNDAAKSFGVSRSTFKRICRGLGIKRWQ 41
                 7899***********************************5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.411171IPR003035RWP-RK domain
PfamPF020428.7E-15140IPR003035RWP-RK domain
Gene3DG3DSA:3.10.20.2401.8E-1790169No hitNo description
SuperFamilySSF542771.89E-1890173No hitNo description
SMARTSM006663.6E-1991173IPR000270PB1 domain
PROSITE profilePS5174520.9991173IPR000270PB1 domain
PfamPF005641.1E-1694170IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MNLENVSKHF GRPLNDAAKS FGVSRSTFKR ICRGLGIKRW QSGKRRMNGN FSSRLGKGIN  60
QEQPGRRNFG STSMAAVNET VVVHSSQDLN KMIVKATYKD VAIRFKLPDL SGIAELENNV  120
IERLHLKRNN FTIKYQDEEG DLVLIACDKD VRECIEISRS LKETTVKLLL DLPLNHNAL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017226040.11e-119PREDICTED: protein NLP7-like isoform X1
RefseqXP_017226041.11e-119PREDICTED: protein NLP7-like isoform X2
TrEMBLA0A175YIK01e-129A0A175YIK0_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12836219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.15e-18NIN like protein 7