PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_029986
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 326aa    MW: 36376.9 Da    PI: 9.5563
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_029986genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.2e-113983246
                 XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                 ++ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  DCAR_029986 39 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMQLTQLEQELQ 83
                 567899**************************9999998887665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.9E-838101IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.534084IPR004827Basic-leucine zipper domain
PfamPF001703.1E-84183IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.6E-74286No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-84387No hitNo description
PROSITE patternPS0003604560IPR004827Basic-leucine zipper domain
PfamPF141442.6E-31125198IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MMTNGSPRTD TSTDGDTDDR APGFNNGQMA VSDASERSRD QKTLRRLAQN REAARKSRLR  60
KKAYVQQLES SRMQLTQLEQ ELQRARQQGK YISSSGDAQS ISANGALAFD VEYARWLEEH  120
TRRANELRGA VSAHAGDAEL RIIVDGLLTH YDDIYRIKSE AAKADVFHIL SGMWKTPAER  180
CFLWLGGFRS SELLKMLISK LEPLTEQQLL AITNLQQSSQ QAEDALSQGM EALQQSLADT  240
LAGSQTPINS PGNVANYMGQ MAMAMGKLGT LENFIRQADN LRQQTFQQLH RILTTRQSAR  300
ALIAVNDYSS RLRALSSLWL ARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017227270.10.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_017227271.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotP239231e-172HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A175YGC70.0A0A175YGC7_DAUCS; Uncharacterized protein
STRINGMigut.F00128.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-139TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]