PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_029581
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 434aa    MW: 48940.8 Da    PI: 9.8508
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_029581genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025374393323
                  ETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                  C+ Cgk+F ++ +L++H++++
  DCAR_029581 374 CSQCGKTF-DPNQLHKHMSSC 393
                  ********.*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF061364.3E-4216300IPR010369Protein of unknown function DUF966
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MEATAQQGVG EVRRLHIVYF ISRKGRIEHP HLIRVHHLSR GGVRLRDIKR WLSELRGKDM  60
PESYAWSYKR RYKTGFVWQD LLDEDLITPI ADNEYVLKGS EIPSVDSDLE LGQFCDGKEG  120
VKQKEQPKSE AKFNDSKSSS QAKSREQESP TSMLTKPLLE IEEQSSTFSS DSSMSLTDDS  180
PKFEHKIHST LRKEREDHIF PDEEAIQEVE REALGEKAPF IPNLANENKK IPTKNFGKSK  240
KADPTPDQSS SSKSKFTRSR SYSNNASNIF RNLLTCGTVD TKDSSMMVIK RKSTSSKPSK  300
LDLSTYKGNQ NMAQICRGDV VGGSERISRN FWHETQENDH RKSCDGASHS RQKKEMNSQR  360
PVPPAYRPRN GPNCSQCGKT FDPNQLHKHM SSCRGMKALA KAAAATTAAN TSSYSHRRST  420
DSPRPSIFKP LLD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017224667.10.0PREDICTED: uncharacterized protein LOC108200907 isoform X2
TrEMBLA0A175YFK70.0A0A175YFK7_DAUCS; Uncharacterized protein
STRINGPGSC0003DMT4000798951e-118(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52061315