PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_029574
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 700aa    MW: 77103.3 Da    PI: 5.1593
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_029574genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000436384223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 kC +C+  F +  n++rHir+H
  DCAR_029574 63 KCDKCSLEFCSTVNYRRHIRVH 84
                 7*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.1626289IPR007087Zinc finger, C2H2
PROSITE patternPS0002806484IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    Send to blast
MIVGVGNDVQ DALVRQTIGI GPYLSFPRVN DVPMQWVQLL NGFDQQELYG WPMLTPLKIQ  60
MQKCDKCSLE FCSTVNYRRH IRVHRRLKVD KDSYKSRDSL GAFWDKVSLD EAKNILSFKD  120
VTLEGLPGSS IIKALASFIR APGFCTLPQV YVKAGLVLLD AIEATPSRLP ISSQELFTVL  180
DDASERTFLS GSTEGSVQKF IFDGEARKVG LEIKNLVACT SFLIEQSLVK AWIADKDAEA  240
LRCQKLLVEE EEAAQRRQAE LLERKRLRKL RQKEQKTKGR SCKETTVLTS AADILETVPS  300
AESSTPPQSE ADLHAVSSPP QSEVDLHSSS SPPQSEGDLH TSSSLPHSEG DLHELEDHSS  360
VIEPVHIFNN EVNGHINIEG GYNSELVDIG RAKNVELPES QDSNNQQIVD SKLQVLESKS  420
EQNACHPSHS LDVVKPDPIQ AQAPPNDLMV APVNGSDIST GKGTVENGRE CVSALLHERE  480
ISQTDHTSCE VMIGSITVTL RNCTTQKQHD DSQSESLHEN CSIDHVTCEN VGAHYKQIKP  540
ESTMNNTLIS NDRHEVESEF VVQTGVTGVG TMPDKCSHAS SEVDSDSKQN DFIQPAKVAL  600
SSHSARAFLA HRWKEAISED HETLVLSQEA ESQGHCDAIN ECSEAVSTVK AIDSEELSVL  660
GRAKNFLDIV GAPEYPTSRP VDSKRTSKPR KGYQMKVQR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1262269ERKRLRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017223908.10.0PREDICTED: uncharacterized protein LOC108200310
TrEMBLA0A175YFK30.0A0A175YFK3_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37222128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.15e-98C2H2-like zinc finger protein