PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_027750
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 275aa    MW: 30572.8 Da    PI: 5.1905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_027750genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19128178255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr ++ +g+++AeIrdp   + +  r +lg+f+t+ eAaka+++a+ +l+g
  DCAR_027750 128 HYRGVRKRP-WGKYAAEIRDP---NrRGSRLWLGTFDTPVEAAKAYDRAAYNLRG 178
                  8********.**********9...4334*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-31127187IPR001471AP2/ERF domain
CDDcd000181.05E-29127186No hitNo description
PROSITE profilePS5103223.894128186IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-22128188IPR016177DNA-binding domain
SMARTSM003804.6E-35128192IPR001471AP2/ERF domain
PfamPF008472.4E-13128178IPR001471AP2/ERF domain
PRINTSPR003673.8E-13129140IPR001471AP2/ERF domain
PRINTSPR003673.8E-13168188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MATETEVSAL EIIRQHLLEE FSPVDTFINH FSQFDSVFIA DNSFSPSDSS SSSASSCTEI  60
AISDYFMPDE IDAFSFSQDL FISDQNQHIQ QQLNIELPEP DKNFELTESK STQPQHTKSS  120
TKEEDKKHYR GVRKRPWGKY AAEIRDPNRR GSRLWLGTFD TPVEAAKAYD RAAYNLRGSK  180
AILNFPLEIG KSNDEAGATN RGHKRTKQVT NIEDNTASTK KPKASTQNIS SNNVTDCLPP  240
VFTPSSSSEI MNLSDFPPLS PLASLGSYHQ LLAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-29127189163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00549DAPTransfer from AT5G47230Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017220936.10.0PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A175YNZ20.0A0A175YNZ2_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-46ethylene responsive element binding factor 5