PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026719
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 318aa    MW: 35528.7 Da    PI: 8.9002
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026719genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.45e-31172227156
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  k+r++W+peLH+rF++a++qLGG+++ tPk+i+elmkv+gLt+++vkSHLQkYRl+
  DCAR_026719 172 KARRCWSPELHKRFLQALQQLGGAHVGTPKQIRELMKVDGLTNDEVKSHLQKYRLH 227
                  68****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.891168229IPR017930Myb domain
SuperFamilySSF466892.94E-17170230IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-27171230IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-26172227IPR006447Myb domain, plants
PfamPF002492.9E-8174225IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MQKSLDYIES LEEERRKIQV FQRELPLCLD LVSQAIEKCK KDFYSPKQLS ECTEQASSEG  60
PVLEEFMPIK RAASSNEDEQ EPHFKKAKNV MTDNNRSEKS LKKSDWLRSD SPQKLSVVEV  120
NKNGNGGAFH PFKREDKKSE ETPVAAAASS TEEAGGSSGG CKAEDKEDPR RKARRCWSPE  180
LHKRFLQALQ QLGGAHVGTP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PSPSSNNAQA  240
PQFVVVGGIW MPPPPEYTAA ATTEEAGLMI RSSNGIYTPK ATLPKIRRQP SEADYSDKNG  300
SYNQTRSRSN SPESSSF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-13172225154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-13172225154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-13172225154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-13172225154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-13172225255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017222105.10.0PREDICTED: uncharacterized protein LOC108198836
SwissprotQ9FPE84e-78HHO3_ARATH; Transcription factor HHO3
TrEMBLA0A175YQG20.0A0A175YQG2_DAUCS; Uncharacterized protein
STRINGVIT_01s0011g03110.t011e-112(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52192438
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-75G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]