PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_025014
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 179aa    MW: 20091.3 Da    PI: 4.7868
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_025014genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-191463255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++aa++ ++g
  DCAR_025014 14 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDAAALHFRG 63
                 69****999.**********8...325***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.56E-231373No hitNo description
SuperFamilySSF541711.05E-221372IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-321472IPR001471AP2/ERF domain
SMARTSM003803.9E-361477IPR001471AP2/ERF domain
PROSITE profilePS5103223.5381471IPR001471AP2/ERF domain
PfamPF008472.6E-121463IPR001471AP2/ERF domain
PRINTSPR003673.5E-101526IPR001471AP2/ERF domain
PRINTSPR003673.5E-103753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MGDHNNHNGG TSSAYRGVRK RKWGKWVSEI REPGTKTRIW LGSFETPEMA AAAYDAAALH  60
FRGREARLNF PELMDYLPRP ASSSADDIRL AAQESAMRLK RSTEEPECGG SSSSSYRLPV  120
TVGLSPSQIQ AINESPLDSP KMWNRFNDGL MLDDQRTYFC NDMEIDAWEE IPDDSLWD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-161571663ATERF1
3gcc_A8e-161571663ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017217944.11e-131PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I29e-63ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A161X6B01e-130A0A161X6B0_DAUCS; Uncharacterized protein
STRINGGorai.005G116500.12e-71(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-56ERF family protein