PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_024901
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 177aa    MW: 19954.7 Da    PI: 7.0615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_024901genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.6e-071361555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                  + +E++RR++++    eL +l+P +   + +   s  + +e+A +YIk+Lq
  DCAR_024901 13 RKTIEKKRRNHMKGLCTELNSLVPRQ---NLREvKSLTDQVEEAEKYIKKLQ 61
                 6789*********************7...455558888*************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.975860IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-101079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-101079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MDPNQSSSSK ADRKTIEKKR RNHMKGLCTE LNSLVPRQNL REVKSLTDQV EEAEKYIKKL  60
QVKLEKMKEK KERLMRDNPN ARFYGGLATQ PQIEIHESGD ALVLNLVTGL EFEFMFNETI  120
RMCHEEGLDI VNASFSVTEN SVLHNIHSKI GESAEEGAIA RVTEKLNTFV AGSASY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017216762.11e-128PREDICTED: uncharacterized protein LOC108194323
TrEMBLA0A161ZNC81e-127A0A161ZNC8_DAUCS; Uncharacterized protein
STRINGXP_008225174.12e-60(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-23bHLH family protein