PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022032
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family B3
Protein Properties Length: 79aa    MW: 8809.27 Da    PI: 10.177
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022032genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.6e-114543286
                 --SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
           B3 32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                 e+ +++l de g++ + ++    k   + l++GWk+F+ +++L  gD++vF+++ 
  DCAR_022032  4 EDAKVVLVDEAGQERDTTY--LAKH--HGLSAGWKRFAMEHELVKGDVLVFHMIT 54
                 5679***************..4444..55***********************654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508639.643164IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.0E-9258IPR015300DNA-binding pseudobarrel domain
CDDcd100173.59E-10262No hitNo description
SuperFamilySSF1019363.34E-10259IPR015300DNA-binding pseudobarrel domain
PfamPF023628.7E-8454IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
MPSEDAKVVL VDEAGQERDT TYLAKHHGLS AGWKRFAMEH ELVKGDVLVF HMITHYIFKA  60
IKKSSPPARA KVVKFKTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007042393.17e-16AP2/B3-like transcriptional factor family protein, putative isoform 1
RefseqXP_007042394.17e-16AP2/B3-like transcriptional factor family protein, putative isoform 1
TrEMBLA0A0K9QC357e-17A0A0K9QC35_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-16B3 family protein