PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021251
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 435aa    MW: 50362 Da    PI: 9.783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021251genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.9e-081866555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                  + +E++RR ++++ +++L +llP   +k++s  ++K++   +Av+YI+sLq
  DCAR_021251 18 RKYIEKNRRCQMKTLYFKLGSLLPRqHCKEGSALPDKID---EAVKYIQSLQ 66
                 5679*********************77788888888886...9********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.22E-81385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.5851365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-81684IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-51966IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-41971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.001532170No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MESTSLYNPA SSAPKMERKY IEKNRRCQMK TLYFKLGSLL PRQHCKEGSA LPDKIDEAVK  60
YIQSLQLELE KLKDNKDKLM SRKREHSCIT DDTMSPIKKS RSPHLEIQEM GPDMDMVLVN  120
GYDSFINFNE IIHVLHQQGA EVVQASFSST GNSVFHILHP KAVPSFSSST SMECLADMAR  180
AKGTKPISIK ACSEPTNHIR SSENRNIYEK LGQQEREITD KLQTLKLNQA KLHKKRKSIS  240
WYGHGYYPSS TKEDIDRKLW VIRDLKQSLP EPTDSKKPGH RKNTHLCSPE EILLNEQLVK  300
LHKGRLHGSM NLVEERLLLQ KIEKAREEKE KICSDAVPAK QAPYIFMYLH NYKRLMNTSR  360
GYTNQYSEEA IRHCIKVLSN QVEELRMKKM RYEAYRNRLV LEQAATEEEI RIFERKLENI  420
KQKKVELASK SQAI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257005.10.0PREDICTED: uncharacterized protein LOC108226549
TrEMBLA0A164W7D60.0A0A164W7D6_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-21bHLH family protein