PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_019835
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 499aa    MW: 54990.1 Da    PI: 8.1449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_019835genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11205249347
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                  + k  rr+++NReAAr+sR+RKka+i++Le+   +L++  ++ +k
  DCAR_019835 205 DAKTLRRLAQNREAARKSRLRKKAYIQQLENSRMKLTQLEQQIQK 249
                  67999*************************998888877766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7201250No hitNo description
SMARTSM003384.4E-7203265IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186205249IPR004827Basic-leucine zipper domain
PfamPF001707.6E-9206250IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-7207248No hitNo description
PROSITE patternPS000360210225IPR004827Basic-leucine zipper domain
PfamPF141441.7E-31298371IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MGTLPRSLLQ SNIATSEQES KLLSASNEAS PFMSSSSKNQ VSDRHQFHHQ IPSGVMIQPN  60
SSSSTLNPSS SFMDKDGAGP YDLGEFDQAL FLYLDGQNPN SSVSLQEQNT AAAAANIGVR  120
PPTLNIFPSQ PMHVEPSSST KVSAISLVNP AIVGSKRPLS ETSEQKATVV NVPSADPQPP  180
KGVKREGNSS RGGANPENDR PKTPDAKTLR RLAQNREAAR KSRLRKKAYI QQLENSRMKL  240
TQLEQQIQKT ARAQGYATAG SSLAAEHGLP VGMGNLNSDA VIFDVEYARW LEEHQRMMCE  300
LRAAVQQHIG EDELRLFVEN CLSHFNEVIN LKSMLAKTDV FHLLSGTWKT PAERCFMWIG  360
GFRPSEIIKM IPSQIEPLSE QQLMALYGLQ QSTLEAEEAL SQGLDSLNQS LSNVIVSDSL  420
TSPANMANYM EQMSVAMAKL STLEGFVRQA DSLRHQTFHR LHQLLTTRQS AKSVLAIAEY  480
FHRLRTLSSL WVARPRHD*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257101.10.0PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A161ZZL80.0A0A161ZZL8_DAUCS; Uncharacterized protein
STRINGXP_009611363.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-177bZIP family protein