![]() |
Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
|
Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | DCAR_019835 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 499aa MW: 54990.1 Da PI: 8.1449 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 205 | 249 | 3 | 47 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 + k rr+++NReAAr+sR+RKka+i++Le+ +L++ ++ +k DCAR_019835 205 DAKTLRRLAQNREAARKSRLRKKAYIQQLENSRMKLTQLEQQIQK 249 67999*************************998888877766665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 201 | 250 | No hit | No description |
SMART | SM00338 | 4.4E-7 | 203 | 265 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.186 | 205 | 249 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.6E-9 | 206 | 250 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-7 | 207 | 248 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 210 | 225 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-31 | 298 | 371 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 499 aa Download sequence Send to blast |
MGTLPRSLLQ SNIATSEQES KLLSASNEAS PFMSSSSKNQ VSDRHQFHHQ IPSGVMIQPN 60 SSSSTLNPSS SFMDKDGAGP YDLGEFDQAL FLYLDGQNPN SSVSLQEQNT AAAAANIGVR 120 PPTLNIFPSQ PMHVEPSSST KVSAISLVNP AIVGSKRPLS ETSEQKATVV NVPSADPQPP 180 KGVKREGNSS RGGANPENDR PKTPDAKTLR RLAQNREAAR KSRLRKKAYI QQLENSRMKL 240 TQLEQQIQKT ARAQGYATAG SSLAAEHGLP VGMGNLNSDA VIFDVEYARW LEEHQRMMCE 300 LRAAVQQHIG EDELRLFVEN CLSHFNEVIN LKSMLAKTDV FHLLSGTWKT PAERCFMWIG 360 GFRPSEIIKM IPSQIEPLSE QQLMALYGLQ QSTLEAEEAL SQGLDSLNQS LSNVIVSDSL 420 TSPANMANYM EQMSVAMAKL STLEGFVRQA DSLRHQTFHR LHQLLTTRQS AKSVLAIAEY 480 FHRLRTLSSL WVARPRHD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_002308062.2 | 0.0 | hypothetical protein POPTR_0006s05770g, partial | ||||
Swissprot | O24160 | 1e-119 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | B9HA88 | 0.0 | B9HA88_POPTR; Uncharacterized protein (Fragment) | ||||
STRING | GLYMA03G29825.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-177 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | DCAR_019835 |