PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_018163
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 234aa    MW: 25917.2 Da    PI: 4.8064
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_018163genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.33e-1662110255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++aa + l+g
  DCAR_018163  62 LYRGIR--SRKGKWVSEIRVPRT---KTRIWLGTYPTPEMAAAAYDAASLVLKG 110
                  69***6..557*********954...4*********************887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.1E-961109IPR001471AP2/ERF domain
CDDcd000184.86E-1761120No hitNo description
Gene3DG3DSA:3.30.730.103.0E-2562119IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-1762119IPR016177DNA-binding domain
SMARTSM003805.6E-2862124IPR001471AP2/ERF domain
PROSITE profilePS5103219.12462118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MAERDDHQKL RNYPSLSQHF EFECFELLSN NLEGEDYLQR QVLPLSPIIT TSIASSTHTH  60
PLYRGIRSRK GKWVSEIRVP RTKTRIWLGT YPTPEMAAAA YDAASLVLKG PHTALNFPTH  120
EYNNALLLTR GYSTAAVIRV AAANAAASRA VASESLELPA PQLAPQYFSN YVGSNGTDVL  180
GLKEEYVDEE EIFDMPNLLM DMAEGMLISP PMITIPPPSS DDSGQETLWN YTL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251278.11e-173PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLA0A161YEC61e-172A0A161YEC6_DAUCS; Uncharacterized protein
STRINGPOPTR_0003s12120.11e-42(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-24ERF family protein