PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015847
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 182aa    MW: 20528 Da    PI: 9.3352
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015847genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1875125255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIr p +  k +r++lg++ t+e+Aa a+++a+ +l+g
  DCAR_015847  75 RYTGVRRRP-WGKFAAEIRNPAK--KGTRIWLGTYNTPEDAALAYDKAAFRLRG 125
                  79*******.**********844..34*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.06E-2974133No hitNo description
PROSITE profilePS5103223.47275133IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3075133IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-2275133IPR016177DNA-binding domain
SMARTSM003801.1E-3175139IPR001471AP2/ERF domain
PfamPF008474.3E-1375125IPR001471AP2/ERF domain
PRINTSPR003672.8E-97687IPR001471AP2/ERF domain
PRINTSPR003672.8E-999115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MSFLSISDSD LAMLDLIRNH LLEDTYDFSP LTETNKSNYF IHEQPSCSVD KIVDVKWSEK  60
EVEMPRSNDS RDWKRYTGVR RRPWGKFAAE IRNPAKKGTR IWLGTYNTPE DAALAYDKAA  120
FRLRGSRAKV NFPGMIGSYI TEPIHGDAPK RASHVETTSS SSSSSSAISE DSESSKRRRM  180
V*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2874138468ATERF1
3gcc_A2e-2874138468ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246634.11e-132PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A165A2831e-131A0A165A283_DAUCS; Uncharacterized protein
STRINGXP_009593488.13e-41(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-34ethylene-responsive element binding factor 13