PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015408
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 269aa    MW: 29945.9 Da    PI: 9.3458
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015408genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like811.4e-251172155
      G2-like  1 kprlrWtpeLHerFveaveqLGGse.......kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 k+rl+Wt+eLH+ F +av+qLGG++        AtPk il++m+++gLt++hvkSHLQkYR+
  DCAR_015408 11 KERLKWTQELHDLFEKAVNQLGGPDikirfspGATPKGILKAMGIPGLTIYHVKSHLQKYRI 72
                 68*********************9854444445****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-251073IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-191173IPR006447Myb domain, plants
SuperFamilySSF466891.16E-141173IPR009057Homeodomain-like
PfamPF002491.0E-91371IPR001005SANT/Myb domain
PfamPF143793.0E-18104146IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGSSRSDVAG KERLKWTQEL HDLFEKAVNQ LGGPDIKIRF SPGATPKGIL KAMGIPGLTI  60
YHVKSHLQKY RISQFVPETP NKSKFERRSI SEILPNFSAT AGAQLNEALQ MQVEVQRRLS  120
DQLEVQKNLR LKIEAQGRFL TKIGEEYKTR PDINAKPSKS FSPVSLPSLC DESESDNKEP  180
AESDSDIEIY DTRTTDTSRG SKRLRVDQKD ASPQRHKKLT PESCGQQGML VPKPPRTQCE  240
PPEFGSPWNA VVYCQAPLMP AASYGSFT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-181075159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246600.10.0PREDICTED: protein PHR1-LIKE 1-like
TrEMBLA0A162A8Y80.0A0A162A8Y8_DAUCS; Uncharacterized protein
STRINGPOPTR_0006s10190.18e-93(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA101012026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-48G2-like family protein