PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014481
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 170aa    MW: 17943 Da    PI: 7.8643
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014481genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00022850123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C +C++ F ++  L  H++ H
  DCAR_014481 28 FSCLYCPRKFYTSQALGGHQNAH 50
                 89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.03E-62455No hitNo description
PROSITE profilePS5015710.7412855IPR007087Zinc finger, C2H2
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MMSSTSTETP GLRKQLPQAA ASGGGRMFSC LYCPRKFYTS QALGGHQNAH KRERAAVRRA  60
AASSASASAA IDSSSAACCY YPAGVMDSQM PATTVYWAPQ YPPPQAPQCL HCYSTTTAAA  120
PATPDQNPHH QPGPFALFSN HLQASAAVVD EYDNNDHSAS AHLDLTLRL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245659.11e-121PREDICTED: zinc finger protein KNUCKLES-like
TrEMBLA0A165XH381e-120A0A165XH38_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA92381723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.16e-13C2H2 family protein